Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 PCMTD1-208ENST00000544451 3697 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
LTAP01374 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC10.49□□□□□ -0.73
LTAP01374 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
LTAP01374 S1PR1-201ENST00000305352 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LTAP01374 AC020763.3-201ENST00000625095 2904 ntBASIC10.49□□□□□ -0.73
LTAP01374 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC10.49□□□□□ -0.73
LTAP01374 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
LTAP01374 ETAA1-201ENST00000272342 3418 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LTAP01374 PIGG-208ENST00000504346 3019 ntTSL 2 BASIC10.49□□□□□ -0.73
LTAP01374 IP6K3-201ENST00000293756 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LTAP01374 MRPS16-202ENST00000372945 2634 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LTAP01374 AC011700.1-201ENST00000610409 2627 ntBASIC10.49□□□□□ -0.73
LTAP01374 AAAS-201ENST00000209873 1840 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LTAP01374 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC10.49□□□□□ -0.73
LTAP01374 ADRA1A-210ENST00000519229 1838 ntTSL 5 BASIC10.49□□□□□ -0.73
LTAP01374 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC10.49□□□□□ -0.73
LTAP01374 VPS54-203ENST00000409558 4337 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LTAP01374 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC10.49□□□□□ -0.73
LTAP01374 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC10.49□□□□□ -0.73
LTAP01374 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
LTAP01374 RNASE7-201ENST00000298690 1498 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LTAP01374 TRMT61A-202ENST00000389749 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LTAP01374 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC10.48□□□□□ -0.73
LTAP01374 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
LTAP01374 CCDC163-203ENST00000626657 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
LTAP01374 CSTF2-201ENST00000372972 1958 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LTAP01374 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
LTAP01374 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
LTAP01374 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC10.48□□□□□ -0.73
LTAP01374 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC10.48□□□□□ -0.73
LTAP01374 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
LTAP01374 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
LTAP01374 AC138150.2-201ENST00000589796 2053 ntTSL 2 BASIC10.48□□□□□ -0.73
LTAP01374 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
LTAP01374 HOPX-202ENST00000337881 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LTAP01374 NOP2-212ENST00000541778 3038 ntTSL 2 BASIC10.48□□□□□ -0.73
LTAP01374 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
LTAP01374 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
LTAP01374 DUSP11-202ENST00000443070 2175 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
LTAP01374 YY1AP1-205ENST00000355499 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
LTAP01374 TREH-202ENST00000397925 1718 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
LTAP01374 PDE1B-203ENST00000538346 1711 ntTSL 2 BASIC10.48□□□□□ -0.73
LTAP01374 BTNL8-201ENST00000231229 2229 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
LTAP01374 USB1-207ENST00000563149 1751 ntTSL 2 BASIC10.48□□□□□ -0.73
LTAP01374 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LTAP01374 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LTAP01374 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
LTAP01374 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
LTAP01374 AC005229.1-201ENST00000392885 409 ntBASIC10.48□□□□□ -0.73
LTAP01374 PNMT-202ENST00000394246 821 ntTSL 2 BASIC10.48□□□□□ -0.73
LTAP01374 USB1-202ENST00000423271 1217 ntTSL 2 BASIC10.48□□□□□ -0.73
LTAP01374 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC10.48□□□□□ -0.73
LTAP01374 POM121L10P-201ENST00000436994 1285 ntBASIC10.48□□□□□ -0.73
LTAP01374 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
LTAP01374 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
LTAP01374 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC10.48□□□□□ -0.73
LTAP01374 URGCP-206ENST00000446958 365 ntTSL 2 BASIC10.48□□□□□ -0.73
LTAP01374 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC10.48□□□□□ -0.73
LTAP01374 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC10.48□□□□□ -0.73
LTAP01374 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC10.48□□□□□ -0.73
LTAP01374 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC10.48□□□□□ -0.73
LTAP01374 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LTAP01374 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC10.48□□□□□ -0.73
LTAP01374 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC10.48□□□□□ -0.73
LTAP01374 WASH4P-201ENST00000564273 1246 ntBASIC10.48□□□□□ -0.73
LTAP01374 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC10.48□□□□□ -0.73
LTAP01374 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC10.48□□□□□ -0.73
LTAP01374 PPY2P-201ENST00000582808 702 ntBASIC10.48□□□□□ -0.73
LTAP01374 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
LTAP01374 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC10.48□□□□□ -0.73
LTAP01374 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC10.48□□□□□ -0.73
LTAP01374 AC133540.1-201ENST00000620845 1019 ntBASIC10.48□□□□□ -0.73
LTAP01374 Z98259.2-201ENST00000641583 609 ntBASIC10.48□□□□□ -0.73
LTAP01374 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
LTAP01374 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
LTAP01374 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
LTAP01374 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
LTAP01374 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LTAP01374 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC10.48□□□□□ -0.73
LTAP01374 KIR3DL1-203ENST00000391728 1871 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
LTAP01374 RHOH-222ENST00000617441 1872 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
LTAP01374 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LTAP01374 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
LTAP01374 MPHOSPH10-201ENST00000244230 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LTAP01374 DNAJC30-201ENST00000395176 2485 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
LTAP01374 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC10.48□□□□□ -0.73
LTAP01374 TMEM233-201ENST00000426426 3081 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
LTAP01374 ELP4-203ENST00000395934 1961 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
LTAP01374 MAOA-204ENST00000542639 5438 ntTSL 2 BASIC10.48□□□□□ -0.73
LTAP01374 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC10.48□□□□□ -0.73
LTAP01374 KIAA1958-202ENST00000374244 2643 ntAPPRIS ALT1 TSL 5 BASIC10.48□□□□□ -0.73
LTAP01374 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LTAP01374 IL19-201ENST00000270218 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LTAP01374 AF013593.1-201ENST00000458074 1487 ntBASIC10.48□□□□□ -0.73
LTAP01374 INPP5J-201ENST00000331075 3347 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
LTAP01374 THPO-203ENST00000445696 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
LTAP01374 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
LTAP01374 METAP1-201ENST00000296411 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LTAP01374 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LTAP01374 CNTROB-203ENST00000565740 2783 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms