Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC11.92□□□□□ -0.5
TMEM235A6NFC5 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC11.92□□□□□ -0.5
TMEM235A6NFC5 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC11.92□□□□□ -0.5
TMEM235A6NFC5 AJ011932.1-201ENST00000621707 465 ntBASIC11.92□□□□□ -0.5
TMEM235A6NFC5 STAT6-202ENST00000454075 3037 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
TMEM235A6NFC5 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
TMEM235A6NFC5 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TMEM235A6NFC5 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TMEM235A6NFC5 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TMEM235A6NFC5 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC11.92□□□□□ -0.5
TMEM235A6NFC5 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TMEM235A6NFC5 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
TMEM235A6NFC5 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
TMEM235A6NFC5 FRMD6-203ENST00000395718 4828 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TMEM235A6NFC5 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
TMEM235A6NFC5 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TMEM235A6NFC5 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
TMEM235A6NFC5 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TMEM235A6NFC5 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TMEM235A6NFC5 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
TMEM235A6NFC5 AL031687.1-201ENST00000450586 2137 ntTSL 2 BASIC11.92□□□□□ -0.5
TMEM235A6NFC5 TNFSF8-201ENST00000223795 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TMEM235A6NFC5 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC11.92□□□□□ -0.5
TMEM235A6NFC5 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC11.92□□□□□ -0.5
TMEM235A6NFC5 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
TMEM235A6NFC5 TRIM3-203ENST00000525074 3044 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
TMEM235A6NFC5 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
TMEM235A6NFC5 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TMEM235A6NFC5 MDH2-203ENST00000432020 1548 ntTSL 2 BASIC11.91□□□□□ -0.5
TMEM235A6NFC5 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC11.91□□□□□ -0.5
TMEM235A6NFC5 ALKBH1-201ENST00000216489 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TMEM235A6NFC5 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC11.91□□□□□ -0.5
TMEM235A6NFC5 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
TMEM235A6NFC5 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
TMEM235A6NFC5 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TMEM235A6NFC5 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TMEM235A6NFC5 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
TMEM235A6NFC5 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC11.91□□□□□ -0.5
TMEM235A6NFC5 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC11.91□□□□□ -0.5
TMEM235A6NFC5 PAX8-202ENST00000263335 3735 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
TMEM235A6NFC5 MOCS1-204ENST00000373188 3358 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
TMEM235A6NFC5 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
TMEM235A6NFC5 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
TMEM235A6NFC5 ZBTB7B-203ENST00000417934 4017 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
TMEM235A6NFC5 TP73-203ENST00000357733 4899 ntTSL 5 BASIC11.91□□□□□ -0.5
TMEM235A6NFC5 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC11.91□□□□□ -0.5
TMEM235A6NFC5 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
TMEM235A6NFC5 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TMEM235A6NFC5 MIR661-201ENST00000384842 89 ntBASIC11.91□□□□□ -0.5
TMEM235A6NFC5 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC11.91□□□□□ -0.5
TMEM235A6NFC5 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC11.91□□□□□ -0.5
TMEM235A6NFC5 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC11.91□□□□□ -0.5
TMEM235A6NFC5 FTH1P14-201ENST00000482930 551 ntBASIC11.91□□□□□ -0.5
TMEM235A6NFC5 GOLGA2P8-201ENST00000505201 779 ntBASIC11.91□□□□□ -0.5
TMEM235A6NFC5 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC11.91□□□□□ -0.5
TMEM235A6NFC5 AC003686.1-201ENST00000550956 1034 ntBASIC11.91□□□□□ -0.5
TMEM235A6NFC5 AC190387.1-201ENST00000551683 408 ntBASIC11.91□□□□□ -0.5
TMEM235A6NFC5 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
TMEM235A6NFC5 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC11.91□□□□□ -0.5
TMEM235A6NFC5 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC11.91□□□□□ -0.5
TMEM235A6NFC5 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC11.91□□□□□ -0.5
TMEM235A6NFC5 AC244669.2-201ENST00000612320 853 ntBASIC11.91□□□□□ -0.5
TMEM235A6NFC5 LARP4-220ENST00000615080 856 ntTSL 5 BASIC11.91□□□□□ -0.5
TMEM235A6NFC5 AC139530.3-201ENST00000620344 690 ntBASIC11.91□□□□□ -0.5
TMEM235A6NFC5 TSC22D1-203ENST00000458659 4820 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
TMEM235A6NFC5 AC008040.5-201ENST00000599781 1781 ntBASIC11.91□□□□□ -0.5
TMEM235A6NFC5 TPO-202ENST00000345913 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TMEM235A6NFC5 MCL1-204ENST00000620947 3626 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
TMEM235A6NFC5 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC11.91□□□□□ -0.5
TMEM235A6NFC5 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
TMEM235A6NFC5 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC11.91□□□□□ -0.5
TMEM235A6NFC5 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TMEM235A6NFC5 L3MBTL1-203ENST00000373135 3218 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
TMEM235A6NFC5 GNPNAT1-201ENST00000216410 3860 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TMEM235A6NFC5 DNMT3B-203ENST00000348286 4048 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
TMEM235A6NFC5 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TMEM235A6NFC5 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TMEM235A6NFC5 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
TMEM235A6NFC5 AP001972.5-201ENST00000624624 2338 ntBASIC11.91□□□□□ -0.5
TMEM235A6NFC5 NLRP7-201ENST00000328092 3299 ntAPPRIS P3 TSL 5 BASIC11.91□□□□□ -0.5
TMEM235A6NFC5 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC11.91□□□□□ -0.5
TMEM235A6NFC5 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
TMEM235A6NFC5 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TMEM235A6NFC5 HSPA2-201ENST00000247207 2767 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
TMEM235A6NFC5 ZNF564-201ENST00000339282 2935 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TMEM235A6NFC5 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TMEM235A6NFC5 KLHL24-211ENST00000476808 2126 ntTSL 2 BASIC11.9□□□□□ -0.5
TMEM235A6NFC5 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
TMEM235A6NFC5 SRP54-201ENST00000216774 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TMEM235A6NFC5 AOC4P-203ENST00000566825 2289 ntBASIC11.9□□□□□ -0.5
TMEM235A6NFC5 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
TMEM235A6NFC5 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TMEM235A6NFC5 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
TMEM235A6NFC5 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC11.9□□□□□ -0.5
TMEM235A6NFC5 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TMEM235A6NFC5 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC11.9□□□□□ -0.5
TMEM235A6NFC5 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC11.9□□□□□ -0.5
TMEM235A6NFC5 KRT15-202ENST00000393974 3758 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
TMEM235A6NFC5 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TMEM235A6NFC5 MIER2-201ENST00000264819 6884 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms