Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
CHD8Q9HCK8 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CHD8Q9HCK8 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
CHD8Q9HCK8 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CHD8Q9HCK8 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC12.5□□□□□ -0.41
CHD8Q9HCK8 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC12.5□□□□□ -0.41
CHD8Q9HCK8 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC12.49□□□□□ -0.41
CHD8Q9HCK8 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC12.49□□□□□ -0.41
CHD8Q9HCK8 KLHDC2-211ENST00000557247 1565 ntTSL 5 BASIC12.49□□□□□ -0.41
CHD8Q9HCK8 NRADDP-202ENST00000641269 1585 ntBASIC12.49□□□□□ -0.41
CHD8Q9HCK8 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CHD8Q9HCK8 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CHD8Q9HCK8 C2orf70-202ENST00000409392 764 ntTSL 3 BASIC12.49□□□□□ -0.41
CHD8Q9HCK8 AL355298.1-201ENST00000425391 180 ntBASIC12.49□□□□□ -0.41
CHD8Q9HCK8 AL662791.4-201ENST00000445544 317 ntTSL 3 BASIC12.49□□□□□ -0.41
CHD8Q9HCK8 AC051619.6-201ENST00000558039 595 ntTSL 4 BASIC12.49□□□□□ -0.41
CHD8Q9HCK8 ELP5-210ENST00000573657 687 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CHD8Q9HCK8 MYL12A-206ENST00000578611 1004 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
CHD8Q9HCK8 MIR4539-201ENST00000579784 60 ntBASIC12.49□□□□□ -0.41
CHD8Q9HCK8 AL353997.3-201ENST00000586597 589 ntBASIC12.49□□□□□ -0.41
CHD8Q9HCK8 RN7SL341P-201ENST00000613745 298 ntBASIC12.49□□□□□ -0.41
CHD8Q9HCK8 AC097634.2-201ENST00000615819 604 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CHD8Q9HCK8 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
CHD8Q9HCK8 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CHD8Q9HCK8 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC12.49□□□□□ -0.41
CHD8Q9HCK8 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC12.49□□□□□ -0.41
CHD8Q9HCK8 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CHD8Q9HCK8 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CHD8Q9HCK8 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
CHD8Q9HCK8 AL157832.2-205ENST00000597245 1649 ntBASIC12.49□□□□□ -0.41
CHD8Q9HCK8 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC12.49□□□□□ -0.41
CHD8Q9HCK8 CSMD2-202ENST00000338325 1544 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CHD8Q9HCK8 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC12.49□□□□□ -0.41
CHD8Q9HCK8 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CHD8Q9HCK8 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
CHD8Q9HCK8 GGPS1-203ENST00000391855 1407 ntTSL 2 BASIC12.49□□□□□ -0.41
CHD8Q9HCK8 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
CHD8Q9HCK8 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC12.49□□□□□ -0.41
CHD8Q9HCK8 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CHD8Q9HCK8 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CHD8Q9HCK8 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
CHD8Q9HCK8 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC12.49□□□□□ -0.41
CHD8Q9HCK8 AC024475.2-201ENST00000312173 879 ntBASIC12.49□□□□□ -0.41
CHD8Q9HCK8 CNTFR-AS1-201ENST00000436360 892 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CHD8Q9HCK8 CNTFR-AS1-203ENST00000453642 723 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CHD8Q9HCK8 AC106748.1-201ENST00000454801 384 ntBASIC12.49□□□□□ -0.41
CHD8Q9HCK8 NUP210P2-201ENST00000510577 282 ntBASIC12.49□□□□□ -0.41
CHD8Q9HCK8 AC015909.2-201ENST00000523083 547 ntTSL 3 BASIC12.49□□□□□ -0.41
CHD8Q9HCK8 ROM1-205ENST00000534093 862 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
CHD8Q9HCK8 AC002558.2-201ENST00000572193 673 ntTSL 3 BASIC12.49□□□□□ -0.41
CHD8Q9HCK8 RPL37A-212ENST00000600880 425 ntTSL 2 BASIC12.49□□□□□ -0.41
CHD8Q9HCK8 AL355353.1-201ENST00000604014 330 ntBASIC12.49□□□□□ -0.41
CHD8Q9HCK8 ERGIC3-220ENST00000640748 832 ntTSL 5 BASIC12.49□□□□□ -0.41
CHD8Q9HCK8 SERPINB8-209ENST00000636430 1719 ntTSL 5 BASIC12.49□□□□□ -0.41
CHD8Q9HCK8 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CHD8Q9HCK8 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CHD8Q9HCK8 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
CHD8Q9HCK8 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CHD8Q9HCK8 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CHD8Q9HCK8 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC12.49□□□□□ -0.41
CHD8Q9HCK8 DDX6-202ENST00000526070 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CHD8Q9HCK8 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CHD8Q9HCK8 AP000787.1-205ENST00000536683 1485 ntTSL 5 BASIC12.49□□□□□ -0.41
CHD8Q9HCK8 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
CHD8Q9HCK8 CCDC89-201ENST00000316398 1412 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
CHD8Q9HCK8 AC007431.1-201ENST00000578662 1412 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CHD8Q9HCK8 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
CHD8Q9HCK8 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CHD8Q9HCK8 AC006486.2-201ENST00000624246 2199 ntBASIC12.48□□□□□ -0.41
CHD8Q9HCK8 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC12.48□□□□□ -0.41
CHD8Q9HCK8 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
CHD8Q9HCK8 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CHD8Q9HCK8 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CHD8Q9HCK8 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CHD8Q9HCK8 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC12.48□□□□□ -0.41
CHD8Q9HCK8 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CHD8Q9HCK8 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CHD8Q9HCK8 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CHD8Q9HCK8 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
CHD8Q9HCK8 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC12.48□□□□□ -0.41
CHD8Q9HCK8 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC12.48□□□□□ -0.41
CHD8Q9HCK8 APOC3-201ENST00000227667 550 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CHD8Q9HCK8 SUCLG2P2-201ENST00000307241 1296 ntBASIC12.48□□□□□ -0.41
CHD8Q9HCK8 TCTE1-201ENST00000371504 616 ntTSL 3 BASIC12.48□□□□□ -0.41
CHD8Q9HCK8 IGLV3-21-201ENST00000390308 602 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
CHD8Q9HCK8 ADPGK-202ENST00000456471 808 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CHD8Q9HCK8 BCRP5-201ENST00000514371 253 ntBASIC12.48□□□□□ -0.41
CHD8Q9HCK8 FAM83A-AS1-201ENST00000517519 1158 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CHD8Q9HCK8 AC211476.2-201ENST00000608799 708 ntBASIC12.48□□□□□ -0.41
CHD8Q9HCK8 AC012186.3-201ENST00000623850 485 ntBASIC12.48□□□□□ -0.41
CHD8Q9HCK8 AC073488.1-201ENST00000416620 1600 ntBASIC12.48□□□□□ -0.41
CHD8Q9HCK8 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CHD8Q9HCK8 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CHD8Q9HCK8 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC12.48□□□□□ -0.41
CHD8Q9HCK8 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CHD8Q9HCK8 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CHD8Q9HCK8 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC12.48□□□□□ -0.41
CHD8Q9HCK8 DHRS1-202ENST00000396813 1470 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
CHD8Q9HCK8 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CHD8Q9HCK8 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms