Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CBX8Q9HC52 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CBX8Q9HC52 AC131902.2-201ENST00000566892 2172 ntBASIC15.53■□□□□ 0.08
CBX8Q9HC52 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CBX8Q9HC52 GABRR2-201ENST00000402938 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CBX8Q9HC52 PIGC-202ENST00000367728 2630 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
CBX8Q9HC52 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CBX8Q9HC52 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CBX8Q9HC52 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC15.53■□□□□ 0.08
CBX8Q9HC52 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CBX8Q9HC52 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CBX8Q9HC52 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CBX8Q9HC52 SMARCA2-254ENST00000636903 2471 ntTSL 5 BASIC15.53■□□□□ 0.08
CBX8Q9HC52 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CBX8Q9HC52 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CBX8Q9HC52 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CBX8Q9HC52 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CBX8Q9HC52 PES1-205ENST00000405677 2708 ntTSL 2 BASIC15.52■□□□□ 0.08
CBX8Q9HC52 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CBX8Q9HC52 KIR3DL1-203ENST00000391728 1871 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CBX8Q9HC52 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CBX8Q9HC52 ACER1-201ENST00000301452 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CBX8Q9HC52 IP6K3-201ENST00000293756 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CBX8Q9HC52 CAPRIN1-212ENST00000532820 3438 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
CBX8Q9HC52 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CBX8Q9HC52 NDRG2-201ENST00000298684 1784 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CBX8Q9HC52 PPP2R2C-204ENST00000506140 1780 ntTSL 2 BASIC15.52■□□□□ 0.08
CBX8Q9HC52 ARHGEF9-220ENST00000635729 1761 ntTSL 5 BASIC15.52■□□□□ 0.08
CBX8Q9HC52 PAM-203ENST00000346918 3302 ntTSL 5 BASIC15.52■□□□□ 0.08
CBX8Q9HC52 BX324167.2-201ENST00000623717 3316 ntBASIC15.52■□□□□ 0.08
CBX8Q9HC52 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CBX8Q9HC52 DMBX1-201ENST00000360032 2880 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CBX8Q9HC52 GLIS3-202ENST00000381971 3961 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
CBX8Q9HC52 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CBX8Q9HC52 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CBX8Q9HC52 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CBX8Q9HC52 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC15.52■□□□□ 0.08
CBX8Q9HC52 MIR193BHG-211ENST00000641433 5365 ntBASIC15.52■□□□□ 0.08
CBX8Q9HC52 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CBX8Q9HC52 PLEKHG3-203ENST00000471182 3106 ntTSL 5 BASIC15.52■□□□□ 0.08
CBX8Q9HC52 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
CBX8Q9HC52 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CBX8Q9HC52 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CBX8Q9HC52 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
CBX8Q9HC52 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC15.52■□□□□ 0.08
CBX8Q9HC52 FAM58BP-201ENST00000439056 645 ntBASIC15.52■□□□□ 0.08
CBX8Q9HC52 CHCHD2P2-201ENST00000503744 321 ntBASIC15.52■□□□□ 0.08
CBX8Q9HC52 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
CBX8Q9HC52 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
CBX8Q9HC52 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
CBX8Q9HC52 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CBX8Q9HC52 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CBX8Q9HC52 RN7SL455P-201ENST00000580629 282 ntBASIC15.52■□□□□ 0.08
CBX8Q9HC52 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC15.52■□□□□ 0.08
CBX8Q9HC52 BTNL10-201ENST00000595971 695 ntBASIC15.52■□□□□ 0.08
CBX8Q9HC52 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC15.52■□□□□ 0.08
CBX8Q9HC52 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC15.52■□□□□ 0.08
CBX8Q9HC52 PARP10-205ENST00000525773 3404 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
CBX8Q9HC52 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CBX8Q9HC52 GK-203ENST00000378943 3707 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CBX8Q9HC52 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
CBX8Q9HC52 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
CBX8Q9HC52 NLRP7-201ENST00000328092 3299 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.07
CBX8Q9HC52 UBE2I-202ENST00000355803 3253 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
CBX8Q9HC52 LNP1-201ENST00000383693 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CBX8Q9HC52 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CBX8Q9HC52 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC15.52■□□□□ 0.07
CBX8Q9HC52 RBM10-206ENST00000628161 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CBX8Q9HC52 IL19-201ENST00000270218 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CBX8Q9HC52 RNASE7-201ENST00000298690 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CBX8Q9HC52 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC15.52■□□□□ 0.07
CBX8Q9HC52 SLC25A35-203ENST00000579192 2136 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CBX8Q9HC52 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
CBX8Q9HC52 PLA2G6-202ENST00000335539 3060 ntTSL 5 BASIC15.52■□□□□ 0.07
CBX8Q9HC52 RGS16-201ENST00000367558 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CBX8Q9HC52 TVP23A-201ENST00000299866 3360 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
CBX8Q9HC52 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CBX8Q9HC52 KIF3A-208ENST00000618515 3333 ntTSL 5 BASIC15.51■□□□□ 0.07
CBX8Q9HC52 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CBX8Q9HC52 AC092117.1-201ENST00000621230 3250 ntBASIC15.51■□□□□ 0.07
CBX8Q9HC52 CES1-201ENST00000360526 2006 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CBX8Q9HC52 TMEM123-202ENST00000398136 3579 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CBX8Q9HC52 FLT4-212ENST00000619105 3806 ntTSL 5 BASIC15.51■□□□□ 0.07
CBX8Q9HC52 CSTF2-201ENST00000372972 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CBX8Q9HC52 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CBX8Q9HC52 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CBX8Q9HC52 CEP63-215ENST00000606977 2800 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
CBX8Q9HC52 HOPX-202ENST00000337881 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CBX8Q9HC52 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC15.51■□□□□ 0.07
CBX8Q9HC52 MOCS1-204ENST00000373188 3358 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CBX8Q9HC52 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CBX8Q9HC52 MLX-203ENST00000435881 2428 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CBX8Q9HC52 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
CBX8Q9HC52 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CBX8Q9HC52 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC15.51■□□□□ 0.07
CBX8Q9HC52 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC15.51■□□□□ 0.07
CBX8Q9HC52 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CBX8Q9HC52 RN7SL752P-201ENST00000463779 287 ntBASIC15.51■□□□□ 0.07
CBX8Q9HC52 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CBX8Q9HC52 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms