Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
ATP6V0A4Q9HBG4 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
ATP6V0A4Q9HBG4 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC15.48■□□□□ 0.07
ATP6V0A4Q9HBG4 FMO6P-201ENST00000236166 1620 ntBASIC15.48■□□□□ 0.07
ATP6V0A4Q9HBG4 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC15.48■□□□□ 0.07
ATP6V0A4Q9HBG4 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
ATP6V0A4Q9HBG4 BAK1P1-201ENST00000317045 636 ntBASIC15.48■□□□□ 0.07
ATP6V0A4Q9HBG4 NME4-203ENST00000397722 1232 ntTSL 2 BASIC15.48■□□□□ 0.07
ATP6V0A4Q9HBG4 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC15.48■□□□□ 0.07
ATP6V0A4Q9HBG4 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC15.48■□□□□ 0.07
ATP6V0A4Q9HBG4 NEU3-207ENST00000534628 746 ntTSL 2 BASIC15.48■□□□□ 0.07
ATP6V0A4Q9HBG4 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
ATP6V0A4Q9HBG4 SNORD3B-1-201ENST00000577988 758 ntBASIC15.48■□□□□ 0.07
ATP6V0A4Q9HBG4 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC15.48■□□□□ 0.07
ATP6V0A4Q9HBG4 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC15.48■□□□□ 0.07
ATP6V0A4Q9HBG4 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC15.48■□□□□ 0.07
ATP6V0A4Q9HBG4 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC15.48■□□□□ 0.07
ATP6V0A4Q9HBG4 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC15.48■□□□□ 0.07
ATP6V0A4Q9HBG4 AC005041.3-201ENST00000606287 649 ntBASIC15.48■□□□□ 0.07
ATP6V0A4Q9HBG4 AC007250.1-201ENST00000608934 338 ntBASIC15.48■□□□□ 0.07
ATP6V0A4Q9HBG4 AL359091.4-201ENST00000610052 409 ntBASIC15.48■□□□□ 0.07
ATP6V0A4Q9HBG4 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
ATP6V0A4Q9HBG4 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
ATP6V0A4Q9HBG4 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
ATP6V0A4Q9HBG4 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC15.48■□□□□ 0.07
ATP6V0A4Q9HBG4 GOLGA8UP-201ENST00000527159 1755 ntBASIC15.48■□□□□ 0.07
ATP6V0A4Q9HBG4 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
ATP6V0A4Q9HBG4 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
ATP6V0A4Q9HBG4 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
ATP6V0A4Q9HBG4 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC15.48■□□□□ 0.07
ATP6V0A4Q9HBG4 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
ATP6V0A4Q9HBG4 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
ATP6V0A4Q9HBG4 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
ATP6V0A4Q9HBG4 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
ATP6V0A4Q9HBG4 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC15.48■□□□□ 0.07
ATP6V0A4Q9HBG4 AC126335.2-201ENST00000623362 4637 ntBASIC15.48■□□□□ 0.07
ATP6V0A4Q9HBG4 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC15.48■□□□□ 0.07
ATP6V0A4Q9HBG4 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
ATP6V0A4Q9HBG4 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
ATP6V0A4Q9HBG4 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC15.48■□□□□ 0.07
ATP6V0A4Q9HBG4 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC15.48■□□□□ 0.07
ATP6V0A4Q9HBG4 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC15.48■□□□□ 0.07
ATP6V0A4Q9HBG4 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
ATP6V0A4Q9HBG4 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
ATP6V0A4Q9HBG4 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
ATP6V0A4Q9HBG4 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ATP6V0A4Q9HBG4 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
ATP6V0A4Q9HBG4 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC15.47■□□□□ 0.07
ATP6V0A4Q9HBG4 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ATP6V0A4Q9HBG4 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
ATP6V0A4Q9HBG4 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC15.47■□□□□ 0.07
ATP6V0A4Q9HBG4 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ATP6V0A4Q9HBG4 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ATP6V0A4Q9HBG4 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
ATP6V0A4Q9HBG4 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ATP6V0A4Q9HBG4 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
ATP6V0A4Q9HBG4 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
ATP6V0A4Q9HBG4 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC15.47■□□□□ 0.07
ATP6V0A4Q9HBG4 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
ATP6V0A4Q9HBG4 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ATP6V0A4Q9HBG4 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC15.47■□□□□ 0.07
ATP6V0A4Q9HBG4 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
ATP6V0A4Q9HBG4 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC15.47■□□□□ 0.07
ATP6V0A4Q9HBG4 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC15.47■□□□□ 0.07
ATP6V0A4Q9HBG4 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC15.47■□□□□ 0.07
ATP6V0A4Q9HBG4 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC15.47■□□□□ 0.07
ATP6V0A4Q9HBG4 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC15.47■□□□□ 0.07
ATP6V0A4Q9HBG4 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
ATP6V0A4Q9HBG4 AC140113.1-201ENST00000603467 169 ntBASIC15.47■□□□□ 0.07
ATP6V0A4Q9HBG4 AC091769.1-201ENST00000619576 568 ntBASIC15.47■□□□□ 0.07
ATP6V0A4Q9HBG4 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC15.47■□□□□ 0.07
ATP6V0A4Q9HBG4 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ATP6V0A4Q9HBG4 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC15.47■□□□□ 0.07
ATP6V0A4Q9HBG4 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
ATP6V0A4Q9HBG4 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ATP6V0A4Q9HBG4 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ATP6V0A4Q9HBG4 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ATP6V0A4Q9HBG4 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ATP6V0A4Q9HBG4 ST20-AS1-201ENST00000560255 4223 ntBASIC15.47■□□□□ 0.07
ATP6V0A4Q9HBG4 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
ATP6V0A4Q9HBG4 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ATP6V0A4Q9HBG4 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ATP6V0A4Q9HBG4 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC15.46■□□□□ 0.07
ATP6V0A4Q9HBG4 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
ATP6V0A4Q9HBG4 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ATP6V0A4Q9HBG4 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ATP6V0A4Q9HBG4 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
ATP6V0A4Q9HBG4 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC15.46■□□□□ 0.07
ATP6V0A4Q9HBG4 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
ATP6V0A4Q9HBG4 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC15.46■□□□□ 0.07
ATP6V0A4Q9HBG4 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
ATP6V0A4Q9HBG4 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ATP6V0A4Q9HBG4 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
ATP6V0A4Q9HBG4 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
ATP6V0A4Q9HBG4 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
ATP6V0A4Q9HBG4 AL157792.1-201ENST00000488281 530 ntBASIC15.46■□□□□ 0.07
ATP6V0A4Q9HBG4 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC15.46■□□□□ 0.07
ATP6V0A4Q9HBG4 HINT1-205ENST00000508488 703 ntTSL 2 BASIC15.46■□□□□ 0.07
ATP6V0A4Q9HBG4 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC15.46■□□□□ 0.07
ATP6V0A4Q9HBG4 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms