Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC12.68□□□□□ -0.38
RSPO3Q9BXY4 TMED7-201ENST00000456936 3757 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RSPO3Q9BXY4 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RSPO3Q9BXY4 FARS2-201ENST00000274680 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RSPO3Q9BXY4 TMEM30A-203ENST00000475111 2791 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RSPO3Q9BXY4 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC12.68□□□□□ -0.38
RSPO3Q9BXY4 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RSPO3Q9BXY4 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RSPO3Q9BXY4 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RSPO3Q9BXY4 LMO1-201ENST00000335790 1279 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
RSPO3Q9BXY4 OR2K2-202ENST00000374428 1038 ntBASIC12.68□□□□□ -0.38
RSPO3Q9BXY4 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RSPO3Q9BXY4 PDIA3P2-201ENST00000428073 158 ntBASIC12.68□□□□□ -0.38
RSPO3Q9BXY4 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RSPO3Q9BXY4 AC098934.1-203ENST00000442868 1262 ntBASIC12.68□□□□□ -0.38
RSPO3Q9BXY4 AC005077.3-201ENST00000449614 213 ntBASIC12.68□□□□□ -0.38
RSPO3Q9BXY4 AC091804.1-201ENST00000486888 567 ntBASIC12.68□□□□□ -0.38
RSPO3Q9BXY4 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC12.68□□□□□ -0.38
RSPO3Q9BXY4 LMO1-204ENST00000534484 770 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
RSPO3Q9BXY4 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC12.68□□□□□ -0.38
RSPO3Q9BXY4 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
RSPO3Q9BXY4 NAA38-204ENST00000575208 529 ntTSL 3 BASIC12.68□□□□□ -0.38
RSPO3Q9BXY4 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RSPO3Q9BXY4 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC12.68□□□□□ -0.38
RSPO3Q9BXY4 MIR6869-201ENST00000619434 62 ntBASIC12.68□□□□□ -0.38
RSPO3Q9BXY4 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC12.68□□□□□ -0.38
RSPO3Q9BXY4 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC12.68□□□□□ -0.38
RSPO3Q9BXY4 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC12.68□□□□□ -0.38
RSPO3Q9BXY4 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC12.68□□□□□ -0.38
RSPO3Q9BXY4 ACER1-201ENST00000301452 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RSPO3Q9BXY4 TRNAU1AP-201ENST00000373830 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RSPO3Q9BXY4 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC12.68□□□□□ -0.38
RSPO3Q9BXY4 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RSPO3Q9BXY4 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RSPO3Q9BXY4 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
RSPO3Q9BXY4 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RSPO3Q9BXY4 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
RSPO3Q9BXY4 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC12.68□□□□□ -0.38
RSPO3Q9BXY4 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RSPO3Q9BXY4 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC12.67□□□□□ -0.38
RSPO3Q9BXY4 LYRM9-202ENST00000379103 1685 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
RSPO3Q9BXY4 ZNF185-205ENST00000370270 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
RSPO3Q9BXY4 ZNF200-205ENST00000431561 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
RSPO3Q9BXY4 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RSPO3Q9BXY4 BISPR-204ENST00000634675 1806 ntTSL 2 BASIC12.67□□□□□ -0.38
RSPO3Q9BXY4 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RSPO3Q9BXY4 WDR60-202ENST00000407559 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RSPO3Q9BXY4 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RSPO3Q9BXY4 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RSPO3Q9BXY4 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RSPO3Q9BXY4 NUP85-201ENST00000245544 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RSPO3Q9BXY4 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RSPO3Q9BXY4 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RSPO3Q9BXY4 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC12.67□□□□□ -0.38
RSPO3Q9BXY4 MCF2L-213ENST00000421756 3560 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RSPO3Q9BXY4 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
RSPO3Q9BXY4 CTAGE10P-201ENST00000318353 2408 ntBASIC12.67□□□□□ -0.38
RSPO3Q9BXY4 MLX-203ENST00000435881 2428 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RSPO3Q9BXY4 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC12.67□□□□□ -0.38
RSPO3Q9BXY4 UGT3A1-203ENST00000503189 1902 ntTSL 2 BASIC12.67□□□□□ -0.38
RSPO3Q9BXY4 ESRRB-201ENST00000380887 2745 ntTSL 5 BASIC12.67□□□□□ -0.38
RSPO3Q9BXY4 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC12.67□□□□□ -0.38
RSPO3Q9BXY4 FAM86MP-201ENST00000340703 885 ntBASIC12.67□□□□□ -0.38
RSPO3Q9BXY4 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RSPO3Q9BXY4 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RSPO3Q9BXY4 ELK2AP-201ENST00000392510 1007 ntBASIC12.67□□□□□ -0.38
RSPO3Q9BXY4 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC12.67□□□□□ -0.38
RSPO3Q9BXY4 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC12.67□□□□□ -0.38
RSPO3Q9BXY4 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC12.67□□□□□ -0.38
RSPO3Q9BXY4 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC12.67□□□□□ -0.38
RSPO3Q9BXY4 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC12.67□□□□□ -0.38
RSPO3Q9BXY4 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC12.67□□□□□ -0.38
RSPO3Q9BXY4 C3orf35-206ENST00000452017 513 ntAPPRIS P5 TSL 5 BASIC12.67□□□□□ -0.38
RSPO3Q9BXY4 PFN1P12-201ENST00000455938 534 ntBASIC12.67□□□□□ -0.38
RSPO3Q9BXY4 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC12.67□□□□□ -0.38
RSPO3Q9BXY4 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RSPO3Q9BXY4 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC12.67□□□□□ -0.38
RSPO3Q9BXY4 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC12.67□□□□□ -0.38
RSPO3Q9BXY4 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
RSPO3Q9BXY4 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
RSPO3Q9BXY4 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RSPO3Q9BXY4 GOLGA2P5-201ENST00000266746 2395 ntBASIC12.67□□□□□ -0.38
RSPO3Q9BXY4 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
RSPO3Q9BXY4 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RSPO3Q9BXY4 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
RSPO3Q9BXY4 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
RSPO3Q9BXY4 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC12.67□□□□□ -0.38
RSPO3Q9BXY4 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
RSPO3Q9BXY4 KIZ-208ENST00000616848 1875 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
RSPO3Q9BXY4 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC12.67□□□□□ -0.38
RSPO3Q9BXY4 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RSPO3Q9BXY4 PPP1R26P2-201ENST00000611403 3595 ntBASIC12.67□□□□□ -0.38
RSPO3Q9BXY4 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RSPO3Q9BXY4 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC12.67□□□□□ -0.38
RSPO3Q9BXY4 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RSPO3Q9BXY4 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC12.67□□□□□ -0.38
RSPO3Q9BXY4 DRD3-201ENST00000295881 1541 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
RSPO3Q9BXY4 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC12.67□□□□□ -0.38
RSPO3Q9BXY4 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RSPO3Q9BXY4 DDC-212ENST00000615193 1674 ntTSL 3 BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms