Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDH19Q8TAB3 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PCDH19Q8TAB3 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDH19Q8TAB3 AC040160.2-201ENST00000623816 1675 ntBASIC14.36□□□□□ -0.11
PCDH19Q8TAB3 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDH19Q8TAB3 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDH19Q8TAB3 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
PCDH19Q8TAB3 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDH19Q8TAB3 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PCDH19Q8TAB3 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDH19Q8TAB3 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC14.35□□□□□ -0.11
PCDH19Q8TAB3 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
PCDH19Q8TAB3 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDH19Q8TAB3 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDH19Q8TAB3 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC14.35□□□□□ -0.11
PCDH19Q8TAB3 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDH19Q8TAB3 PES1P2-201ENST00000449745 1735 ntBASIC14.35□□□□□ -0.11
PCDH19Q8TAB3 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PCDH19Q8TAB3 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC14.35□□□□□ -0.11
PCDH19Q8TAB3 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PCDH19Q8TAB3 NUTM2HP-201ENST00000442076 2498 ntBASIC14.35□□□□□ -0.11
PCDH19Q8TAB3 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
PCDH19Q8TAB3 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PCDH19Q8TAB3 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PCDH19Q8TAB3 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDH19Q8TAB3 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDH19Q8TAB3 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDH19Q8TAB3 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDH19Q8TAB3 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDH19Q8TAB3 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDH19Q8TAB3 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDH19Q8TAB3 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC14.35□□□□□ -0.11
PCDH19Q8TAB3 MIR557-201ENST00000385239 98 ntBASIC14.35□□□□□ -0.11
PCDH19Q8TAB3 NME4-203ENST00000397722 1232 ntTSL 2 BASIC14.35□□□□□ -0.11
PCDH19Q8TAB3 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PCDH19Q8TAB3 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PCDH19Q8TAB3 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC14.35□□□□□ -0.11
PCDH19Q8TAB3 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PCDH19Q8TAB3 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC14.35□□□□□ -0.11
PCDH19Q8TAB3 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PCDH19Q8TAB3 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC14.35□□□□□ -0.11
PCDH19Q8TAB3 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDH19Q8TAB3 AC242376.1-201ENST00000559033 726 ntBASIC14.35□□□□□ -0.11
PCDH19Q8TAB3 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC14.35□□□□□ -0.11
PCDH19Q8TAB3 AC132825.4-202ENST00000578792 434 ntBASIC14.35□□□□□ -0.11
PCDH19Q8TAB3 MIR3940-201ENST00000579148 102 ntBASIC14.35□□□□□ -0.11
PCDH19Q8TAB3 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC14.35□□□□□ -0.11
PCDH19Q8TAB3 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC14.35□□□□□ -0.11
PCDH19Q8TAB3 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC14.35□□□□□ -0.11
PCDH19Q8TAB3 AL353770.1-201ENST00000614915 403 ntBASIC14.35□□□□□ -0.11
PCDH19Q8TAB3 RETN-203ENST00000629642 400 ntTSL 5 BASIC14.35□□□□□ -0.11
PCDH19Q8TAB3 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDH19Q8TAB3 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDH19Q8TAB3 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
PCDH19Q8TAB3 AC027612.1-201ENST00000445234 2395 ntBASIC14.35□□□□□ -0.11
PCDH19Q8TAB3 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDH19Q8TAB3 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDH19Q8TAB3 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
PCDH19Q8TAB3 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDH19Q8TAB3 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDH19Q8TAB3 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC14.35□□□□□ -0.11
PCDH19Q8TAB3 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDH19Q8TAB3 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC14.35□□□□□ -0.11
PCDH19Q8TAB3 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
PCDH19Q8TAB3 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC14.35□□□□□ -0.11
PCDH19Q8TAB3 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC14.35□□□□□ -0.11
PCDH19Q8TAB3 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PCDH19Q8TAB3 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDH19Q8TAB3 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC14.35□□□□□ -0.11
PCDH19Q8TAB3 OS9-203ENST00000389142 2457 ntTSL 5 BASIC14.35□□□□□ -0.11
PCDH19Q8TAB3 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDH19Q8TAB3 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC14.35□□□□□ -0.11
PCDH19Q8TAB3 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PCDH19Q8TAB3 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDH19Q8TAB3 EML1-203ENST00000334192 4064 ntTSL 5 BASIC14.35□□□□□ -0.11
PCDH19Q8TAB3 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PCDH19Q8TAB3 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDH19Q8TAB3 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDH19Q8TAB3 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
PCDH19Q8TAB3 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDH19Q8TAB3 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDH19Q8TAB3 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDH19Q8TAB3 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.34□□□□□ -0.11
PCDH19Q8TAB3 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDH19Q8TAB3 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PCDH19Q8TAB3 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDH19Q8TAB3 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC14.34□□□□□ -0.11
PCDH19Q8TAB3 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
PCDH19Q8TAB3 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDH19Q8TAB3 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PCDH19Q8TAB3 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDH19Q8TAB3 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDH19Q8TAB3 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PCDH19Q8TAB3 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC14.34□□□□□ -0.11
PCDH19Q8TAB3 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC14.34□□□□□ -0.11
PCDH19Q8TAB3 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC14.34□□□□□ -0.11
PCDH19Q8TAB3 EEF1DP6-201ENST00000449232 372 ntBASIC14.34□□□□□ -0.11
PCDH19Q8TAB3 AL353637.1-201ENST00000451571 732 ntBASIC14.34□□□□□ -0.11
PCDH19Q8TAB3 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC14.34□□□□□ -0.11
PCDH19Q8TAB3 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms