Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 SPTLC1P5-201ENST00000450718 252 ntBASIC13.05□□□□□ -0.32
NUP43Q8NFH3 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC13.05□□□□□ -0.32
NUP43Q8NFH3 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
NUP43Q8NFH3 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC13.05□□□□□ -0.32
NUP43Q8NFH3 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
NUP43Q8NFH3 NAT9-211ENST00000580632 799 ntTSL 3 BASIC13.05□□□□□ -0.32
NUP43Q8NFH3 AL356740.1-201ENST00000602192 1297 ntBASIC13.05□□□□□ -0.32
NUP43Q8NFH3 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC13.05□□□□□ -0.32
NUP43Q8NFH3 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NUP43Q8NFH3 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC13.05□□□□□ -0.32
NUP43Q8NFH3 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NUP43Q8NFH3 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NUP43Q8NFH3 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
NUP43Q8NFH3 KRT18P9-201ENST00000604826 1300 ntBASIC13.05□□□□□ -0.32
NUP43Q8NFH3 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NUP43Q8NFH3 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NUP43Q8NFH3 AC107918.4-201ENST00000641966 3141 ntBASIC13.05□□□□□ -0.32
NUP43Q8NFH3 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
NUP43Q8NFH3 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NUP43Q8NFH3 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NUP43Q8NFH3 AL355102.3-201ENST00000554299 1678 ntBASIC13.05□□□□□ -0.32
NUP43Q8NFH3 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NUP43Q8NFH3 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NUP43Q8NFH3 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NUP43Q8NFH3 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
NUP43Q8NFH3 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NUP43Q8NFH3 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
NUP43Q8NFH3 MSNP1-201ENST00000511640 1732 ntBASIC13.05□□□□□ -0.32
NUP43Q8NFH3 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC13.05□□□□□ -0.32
NUP43Q8NFH3 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NUP43Q8NFH3 AC004241.5-201ENST00000623870 2448 ntBASIC13.04□□□□□ -0.32
NUP43Q8NFH3 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
NUP43Q8NFH3 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
NUP43Q8NFH3 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
NUP43Q8NFH3 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
NUP43Q8NFH3 AF013593.1-201ENST00000458074 1487 ntBASIC13.04□□□□□ -0.32
NUP43Q8NFH3 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
NUP43Q8NFH3 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
NUP43Q8NFH3 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NUP43Q8NFH3 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
NUP43Q8NFH3 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
NUP43Q8NFH3 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC13.04□□□□□ -0.32
NUP43Q8NFH3 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NUP43Q8NFH3 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC13.04□□□□□ -0.32
NUP43Q8NFH3 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
NUP43Q8NFH3 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
NUP43Q8NFH3 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC13.04□□□□□ -0.32
NUP43Q8NFH3 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NUP43Q8NFH3 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NUP43Q8NFH3 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NUP43Q8NFH3 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
NUP43Q8NFH3 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
NUP43Q8NFH3 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
NUP43Q8NFH3 MIR769-201ENST00000390225 118 ntBASIC13.04□□□□□ -0.32
NUP43Q8NFH3 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NUP43Q8NFH3 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC13.04□□□□□ -0.32
NUP43Q8NFH3 AC073150.1-201ENST00000450406 1084 ntBASIC13.04□□□□□ -0.32
NUP43Q8NFH3 RN7SL11P-201ENST00000471305 293 ntBASIC13.04□□□□□ -0.32
NUP43Q8NFH3 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC13.04□□□□□ -0.32
NUP43Q8NFH3 HIST2H2BC-201ENST00000498492 580 ntBASIC13.04□□□□□ -0.32
NUP43Q8NFH3 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC13.04□□□□□ -0.32
NUP43Q8NFH3 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC13.04□□□□□ -0.32
NUP43Q8NFH3 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NUP43Q8NFH3 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC13.04□□□□□ -0.32
NUP43Q8NFH3 RERG-205ENST00000537647 935 ntTSL 2 BASIC13.04□□□□□ -0.32
NUP43Q8NFH3 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC13.04□□□□□ -0.32
NUP43Q8NFH3 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
NUP43Q8NFH3 PHBP15-201ENST00000574228 665 ntBASIC13.04□□□□□ -0.32
NUP43Q8NFH3 IRF3-215ENST00000596822 823 ntTSL 3 BASIC13.04□□□□□ -0.32
NUP43Q8NFH3 AL109837.1-201ENST00000603272 613 ntBASIC13.04□□□□□ -0.32
NUP43Q8NFH3 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NUP43Q8NFH3 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
NUP43Q8NFH3 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NUP43Q8NFH3 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC13.04□□□□□ -0.32
NUP43Q8NFH3 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NUP43Q8NFH3 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC13.04□□□□□ -0.32
NUP43Q8NFH3 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NUP43Q8NFH3 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
NUP43Q8NFH3 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NUP43Q8NFH3 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
NUP43Q8NFH3 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NUP43Q8NFH3 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC13.04□□□□□ -0.32
NUP43Q8NFH3 TP73-207ENST00000378290 1831 ntTSL 2 BASIC13.04□□□□□ -0.32
NUP43Q8NFH3 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NUP43Q8NFH3 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC13.04□□□□□ -0.32
NUP43Q8NFH3 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NUP43Q8NFH3 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC13.04□□□□□ -0.32
NUP43Q8NFH3 PPP1R26P2-201ENST00000611403 3595 ntBASIC13.04□□□□□ -0.32
NUP43Q8NFH3 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
NUP43Q8NFH3 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
NUP43Q8NFH3 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NUP43Q8NFH3 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NUP43Q8NFH3 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
NUP43Q8NFH3 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
NUP43Q8NFH3 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC13.03□□□□□ -0.32
NUP43Q8NFH3 TBC1D27-202ENST00000424239 1573 ntBASIC13.03□□□□□ -0.32
NUP43Q8NFH3 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
NUP43Q8NFH3 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NUP43Q8NFH3 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
NUP43Q8NFH3 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms