Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RP1L1Q8IWN7 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RP1L1Q8IWN7 AC126335.2-201ENST00000623362 4637 ntBASIC12.67□□□□□ -0.38
RP1L1Q8IWN7 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
RP1L1Q8IWN7 TG-201ENST00000220616 8450 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RP1L1Q8IWN7 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RP1L1Q8IWN7 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC12.67□□□□□ -0.38
RP1L1Q8IWN7 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
RP1L1Q8IWN7 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RP1L1Q8IWN7 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RP1L1Q8IWN7 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RP1L1Q8IWN7 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RP1L1Q8IWN7 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RP1L1Q8IWN7 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RP1L1Q8IWN7 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC12.67□□□□□ -0.38
RP1L1Q8IWN7 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC12.67□□□□□ -0.38
RP1L1Q8IWN7 RN7SL846P-201ENST00000467429 292 ntBASIC12.67□□□□□ -0.38
RP1L1Q8IWN7 CHTF8-207ENST00000520529 475 ntTSL 2 BASIC12.67□□□□□ -0.38
RP1L1Q8IWN7 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC12.67□□□□□ -0.38
RP1L1Q8IWN7 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC12.67□□□□□ -0.38
RP1L1Q8IWN7 AC254633.1-201ENST00000606790 345 ntBASIC12.67□□□□□ -0.38
RP1L1Q8IWN7 ODCP-201ENST00000459650 1639 ntBASIC12.67□□□□□ -0.38
RP1L1Q8IWN7 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RP1L1Q8IWN7 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RP1L1Q8IWN7 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC12.67□□□□□ -0.38
RP1L1Q8IWN7 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RP1L1Q8IWN7 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
RP1L1Q8IWN7 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RP1L1Q8IWN7 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RP1L1Q8IWN7 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
RP1L1Q8IWN7 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RP1L1Q8IWN7 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
RP1L1Q8IWN7 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RP1L1Q8IWN7 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
RP1L1Q8IWN7 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC12.66□□□□□ -0.38
RP1L1Q8IWN7 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
RP1L1Q8IWN7 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RP1L1Q8IWN7 SARS-202ENST00000369923 1882 ntTSL 5 BASIC12.66□□□□□ -0.38
RP1L1Q8IWN7 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RP1L1Q8IWN7 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RP1L1Q8IWN7 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC12.66□□□□□ -0.38
RP1L1Q8IWN7 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RP1L1Q8IWN7 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RP1L1Q8IWN7 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RP1L1Q8IWN7 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RP1L1Q8IWN7 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC12.66□□□□□ -0.38
RP1L1Q8IWN7 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC12.66□□□□□ -0.38
RP1L1Q8IWN7 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
RP1L1Q8IWN7 ARPP19-206ENST00000564163 718 ntTSL 2 BASIC12.66□□□□□ -0.38
RP1L1Q8IWN7 TCAF2P1-201ENST00000291129 2421 ntBASIC12.66□□□□□ -0.38
RP1L1Q8IWN7 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RP1L1Q8IWN7 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC12.66□□□□□ -0.38
RP1L1Q8IWN7 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC12.66□□□□□ -0.38
RP1L1Q8IWN7 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RP1L1Q8IWN7 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC12.66□□□□□ -0.38
RP1L1Q8IWN7 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RP1L1Q8IWN7 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC12.66□□□□□ -0.38
RP1L1Q8IWN7 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RP1L1Q8IWN7 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RP1L1Q8IWN7 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RP1L1Q8IWN7 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RP1L1Q8IWN7 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RP1L1Q8IWN7 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
RP1L1Q8IWN7 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RP1L1Q8IWN7 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC12.66□□□□□ -0.38
RP1L1Q8IWN7 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
RP1L1Q8IWN7 BDNF-202ENST00000356660 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RP1L1Q8IWN7 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
RP1L1Q8IWN7 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC12.66□□□□□ -0.38
RP1L1Q8IWN7 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RP1L1Q8IWN7 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
RP1L1Q8IWN7 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC12.66□□□□□ -0.38
RP1L1Q8IWN7 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RP1L1Q8IWN7 CLUL1-202ENST00000400606 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RP1L1Q8IWN7 WASH7P-201ENST00000488147 1351 ntBASIC12.66□□□□□ -0.38
RP1L1Q8IWN7 AC215219.1-201ENST00000400706 1817 ntBASIC12.66□□□□□ -0.38
RP1L1Q8IWN7 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
RP1L1Q8IWN7 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RP1L1Q8IWN7 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC12.66□□□□□ -0.38
RP1L1Q8IWN7 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC12.66□□□□□ -0.38
RP1L1Q8IWN7 PRSS3P1-201ENST00000503996 742 ntBASIC12.66□□□□□ -0.38
RP1L1Q8IWN7 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC12.66□□□□□ -0.38
RP1L1Q8IWN7 SRRM2-AS1-204ENST00000573802 818 ntTSL 2 BASIC12.66□□□□□ -0.38
RP1L1Q8IWN7 KRT8P34-201ENST00000577607 1044 ntBASIC12.66□□□□□ -0.38
RP1L1Q8IWN7 AL133467.4-201ENST00000602953 725 ntBASIC12.66□□□□□ -0.38
RP1L1Q8IWN7 MYO1C-201ENST00000359786 5145 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RP1L1Q8IWN7 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC12.66□□□□□ -0.38
RP1L1Q8IWN7 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RP1L1Q8IWN7 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC12.66□□□□□ -0.38
RP1L1Q8IWN7 FAM237B-201ENST00000637645 3877 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
RP1L1Q8IWN7 MARCH3-201ENST00000308660 4196 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RP1L1Q8IWN7 ZKSCAN5-202ENST00000394170 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RP1L1Q8IWN7 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RP1L1Q8IWN7 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RP1L1Q8IWN7 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
RP1L1Q8IWN7 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
RP1L1Q8IWN7 AC020931.1-201ENST00000589622 1346 ntBASIC12.66□□□□□ -0.38
RP1L1Q8IWN7 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC12.66□□□□□ -0.38
RP1L1Q8IWN7 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RP1L1Q8IWN7 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms