Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 MIR8071-2-201ENST00000616772 65 ntBASIC14.99□□□□□ -0.01
HERC6Q8IVU3 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC14.99□□□□□ -0.01
HERC6Q8IVU3 AC010531.8-201ENST00000623341 685 ntBASIC14.99□□□□□ -0.01
HERC6Q8IVU3 AL357143.1-203ENST00000639750 881 ntBASIC14.99□□□□□ -0.01
HERC6Q8IVU3 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.99□□□□□ -0.01
HERC6Q8IVU3 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
HERC6Q8IVU3 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HERC6Q8IVU3 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
HERC6Q8IVU3 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC14.99□□□□□ -0.01
HERC6Q8IVU3 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
HERC6Q8IVU3 INTS4P1-203ENST00000641008 3683 ntBASIC14.99□□□□□ -0.01
HERC6Q8IVU3 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
HERC6Q8IVU3 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
HERC6Q8IVU3 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
HERC6Q8IVU3 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
HERC6Q8IVU3 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC14.99□□□□□ -0.01
HERC6Q8IVU3 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HERC6Q8IVU3 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HERC6Q8IVU3 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.99□□□□□ -0.01
HERC6Q8IVU3 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HERC6Q8IVU3 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.99□□□□□ -0.01
HERC6Q8IVU3 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HERC6Q8IVU3 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
HERC6Q8IVU3 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
HERC6Q8IVU3 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
HERC6Q8IVU3 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
HERC6Q8IVU3 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HERC6Q8IVU3 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HERC6Q8IVU3 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
HERC6Q8IVU3 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HERC6Q8IVU3 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HERC6Q8IVU3 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.98□□□□□ -0.01
HERC6Q8IVU3 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HERC6Q8IVU3 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HERC6Q8IVU3 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
HERC6Q8IVU3 FAM226B-201ENST00000602508 1490 ntBASIC14.98□□□□□ -0.01
HERC6Q8IVU3 HLA-DMA-202ENST00000395303 1007 ntBASIC14.98□□□□□ -0.01
HERC6Q8IVU3 HMGA1P1-201ENST00000415560 1062 ntBASIC14.98□□□□□ -0.01
HERC6Q8IVU3 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC14.98□□□□□ -0.01
HERC6Q8IVU3 Z82249.1-201ENST00000453866 568 ntTSL 4 BASIC14.98□□□□□ -0.01
HERC6Q8IVU3 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC14.98□□□□□ -0.01
HERC6Q8IVU3 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC14.98□□□□□ -0.01
HERC6Q8IVU3 DUT-207ENST00000559416 635 ntTSL 2 BASIC14.98□□□□□ -0.01
HERC6Q8IVU3 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC14.98□□□□□ -0.01
HERC6Q8IVU3 AC023389.1-201ENST00000577846 576 ntTSL 4 BASIC14.98□□□□□ -0.01
HERC6Q8IVU3 AC090510.3-201ENST00000615831 821 ntBASIC14.98□□□□□ -0.01
HERC6Q8IVU3 AC020904.3-201ENST00000624199 442 ntBASIC14.98□□□□□ -0.01
HERC6Q8IVU3 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
HERC6Q8IVU3 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.98□□□□□ -0.01
HERC6Q8IVU3 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
HERC6Q8IVU3 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HERC6Q8IVU3 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.98□□□□□ -0.01
HERC6Q8IVU3 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HERC6Q8IVU3 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HERC6Q8IVU3 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
HERC6Q8IVU3 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.98□□□□□ -0.01
HERC6Q8IVU3 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
HERC6Q8IVU3 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HERC6Q8IVU3 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
HERC6Q8IVU3 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HERC6Q8IVU3 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC14.97□□□□□ -0.01
HERC6Q8IVU3 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
HERC6Q8IVU3 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
HERC6Q8IVU3 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
HERC6Q8IVU3 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HERC6Q8IVU3 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HERC6Q8IVU3 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HERC6Q8IVU3 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HERC6Q8IVU3 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HERC6Q8IVU3 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
HERC6Q8IVU3 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.97□□□□□ -0.01
HERC6Q8IVU3 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HERC6Q8IVU3 NCR1-204ENST00000357397 594 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HERC6Q8IVU3 SPATA21-202ENST00000375577 1136 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HERC6Q8IVU3 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC14.97□□□□□ -0.01
HERC6Q8IVU3 NQO2-204ENST00000380454 851 ntTSL 2 BASIC14.97□□□□□ -0.01
HERC6Q8IVU3 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HERC6Q8IVU3 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC14.97□□□□□ -0.01
HERC6Q8IVU3 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HERC6Q8IVU3 AL773545.2-201ENST00000442149 472 ntBASIC14.97□□□□□ -0.01
HERC6Q8IVU3 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC14.97□□□□□ -0.01
HERC6Q8IVU3 CD81-209ENST00000492627 886 ntTSL 3 BASIC14.97□□□□□ -0.01
HERC6Q8IVU3 GLUD1P3-201ENST00000507952 896 ntTSL 2 BASIC14.97□□□□□ -0.01
HERC6Q8IVU3 ACY3-202ENST00000529256 933 ntTSL 3 BASIC14.97□□□□□ -0.01
HERC6Q8IVU3 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC14.97□□□□□ -0.01
HERC6Q8IVU3 AC012593.1-214ENST00000586952 767 ntTSL 5 BASIC14.97□□□□□ -0.01
HERC6Q8IVU3 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HERC6Q8IVU3 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC14.97□□□□□ -0.01
HERC6Q8IVU3 GSTT2-202ENST00000621118 1112 ntTSL 5 BASIC14.97□□□□□ -0.01
HERC6Q8IVU3 CR392039.1-201ENST00000623217 204 ntBASIC14.97□□□□□ -0.01
HERC6Q8IVU3 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC14.97□□□□□ -0.01
HERC6Q8IVU3 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.97□□□□□ -0.01
HERC6Q8IVU3 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
HERC6Q8IVU3 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HERC6Q8IVU3 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HERC6Q8IVU3 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HERC6Q8IVU3 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
HERC6Q8IVU3 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HERC6Q8IVU3 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.97□□□□□ -0.01
HERC6Q8IVU3 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms