Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC14.55□□□□□ -0.08
RFWD3Q6PCD5 MIR6842-201ENST00000612539 65 ntBASIC14.55□□□□□ -0.08
RFWD3Q6PCD5 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC14.55□□□□□ -0.08
RFWD3Q6PCD5 AP001184.1-201ENST00000637936 376 ntBASIC14.55□□□□□ -0.08
RFWD3Q6PCD5 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RFWD3Q6PCD5 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC14.55□□□□□ -0.08
RFWD3Q6PCD5 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC14.55□□□□□ -0.08
RFWD3Q6PCD5 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC14.55□□□□□ -0.08
RFWD3Q6PCD5 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RFWD3Q6PCD5 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RFWD3Q6PCD5 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RFWD3Q6PCD5 KRT8P18-201ENST00000413425 1445 ntBASIC14.55□□□□□ -0.08
RFWD3Q6PCD5 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RFWD3Q6PCD5 DUT-208ENST00000559540 1441 ntTSL 2 BASIC14.55□□□□□ -0.08
RFWD3Q6PCD5 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC14.55□□□□□ -0.08
RFWD3Q6PCD5 KRT8P43-201ENST00000406052 1458 ntBASIC14.55□□□□□ -0.08
RFWD3Q6PCD5 AL928654.5-201ENST00000624831 2501 ntBASIC14.55□□□□□ -0.08
RFWD3Q6PCD5 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
RFWD3Q6PCD5 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC14.55□□□□□ -0.08
RFWD3Q6PCD5 AL139158.3-201ENST00000641212 1562 ntBASIC14.55□□□□□ -0.08
RFWD3Q6PCD5 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RFWD3Q6PCD5 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RFWD3Q6PCD5 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC14.55□□□□□ -0.08
RFWD3Q6PCD5 CETP-203ENST00000566128 1733 ntTSL 5 BASIC14.55□□□□□ -0.08
RFWD3Q6PCD5 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC14.55□□□□□ -0.08
RFWD3Q6PCD5 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RFWD3Q6PCD5 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC14.55□□□□□ -0.08
RFWD3Q6PCD5 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC14.55□□□□□ -0.08
RFWD3Q6PCD5 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RFWD3Q6PCD5 GOLGA8EP-201ENST00000530246 1959 ntBASIC14.54□□□□□ -0.08
RFWD3Q6PCD5 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RFWD3Q6PCD5 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RFWD3Q6PCD5 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RFWD3Q6PCD5 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RFWD3Q6PCD5 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC14.54□□□□□ -0.08
RFWD3Q6PCD5 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC14.54□□□□□ -0.08
RFWD3Q6PCD5 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RFWD3Q6PCD5 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RFWD3Q6PCD5 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
RFWD3Q6PCD5 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RFWD3Q6PCD5 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RFWD3Q6PCD5 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RFWD3Q6PCD5 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC14.54□□□□□ -0.08
RFWD3Q6PCD5 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RFWD3Q6PCD5 AL512306.1-201ENST00000432698 848 ntBASIC14.54□□□□□ -0.08
RFWD3Q6PCD5 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC14.54□□□□□ -0.08
RFWD3Q6PCD5 RPS2P36-201ENST00000456516 831 ntBASIC14.54□□□□□ -0.08
RFWD3Q6PCD5 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RFWD3Q6PCD5 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC14.54□□□□□ -0.08
RFWD3Q6PCD5 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC14.54□□□□□ -0.08
RFWD3Q6PCD5 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
RFWD3Q6PCD5 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC14.54□□□□□ -0.08
RFWD3Q6PCD5 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RFWD3Q6PCD5 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC14.54□□□□□ -0.08
RFWD3Q6PCD5 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RFWD3Q6PCD5 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RFWD3Q6PCD5 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RFWD3Q6PCD5 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RFWD3Q6PCD5 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC14.54□□□□□ -0.08
RFWD3Q6PCD5 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
RFWD3Q6PCD5 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
RFWD3Q6PCD5 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RFWD3Q6PCD5 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RFWD3Q6PCD5 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
RFWD3Q6PCD5 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RFWD3Q6PCD5 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RFWD3Q6PCD5 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RFWD3Q6PCD5 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
RFWD3Q6PCD5 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RFWD3Q6PCD5 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RFWD3Q6PCD5 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC14.53□□□□□ -0.08
RFWD3Q6PCD5 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
RFWD3Q6PCD5 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RFWD3Q6PCD5 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.53□□□□□ -0.08
RFWD3Q6PCD5 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RFWD3Q6PCD5 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC14.53□□□□□ -0.08
RFWD3Q6PCD5 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RFWD3Q6PCD5 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC14.53□□□□□ -0.08
RFWD3Q6PCD5 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC14.53□□□□□ -0.08
RFWD3Q6PCD5 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RFWD3Q6PCD5 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RFWD3Q6PCD5 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
RFWD3Q6PCD5 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RFWD3Q6PCD5 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC14.53□□□□□ -0.08
RFWD3Q6PCD5 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RFWD3Q6PCD5 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
RFWD3Q6PCD5 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RFWD3Q6PCD5 HLA-DMA-203ENST00000395305 777 ntBASIC14.53□□□□□ -0.08
RFWD3Q6PCD5 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RFWD3Q6PCD5 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
RFWD3Q6PCD5 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC14.53□□□□□ -0.08
RFWD3Q6PCD5 FXNP2-201ENST00000411625 547 ntBASIC14.53□□□□□ -0.08
RFWD3Q6PCD5 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC14.53□□□□□ -0.08
RFWD3Q6PCD5 HPGD-203ENST00000422112 805 ntTSL 2 BASIC14.53□□□□□ -0.08
RFWD3Q6PCD5 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC14.53□□□□□ -0.08
RFWD3Q6PCD5 ERP29P1-201ENST00000442902 706 ntBASIC14.53□□□□□ -0.08
RFWD3Q6PCD5 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RFWD3Q6PCD5 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC14.53□□□□□ -0.08
RFWD3Q6PCD5 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC14.53□□□□□ -0.08
RFWD3Q6PCD5 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms