Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TTC39BQ5VTQ0 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TTC39BQ5VTQ0 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
TTC39BQ5VTQ0 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TTC39BQ5VTQ0 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TTC39BQ5VTQ0 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC14.54□□□□□ -0.08
TTC39BQ5VTQ0 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TTC39BQ5VTQ0 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC14.54□□□□□ -0.08
TTC39BQ5VTQ0 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC14.54□□□□□ -0.08
TTC39BQ5VTQ0 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TTC39BQ5VTQ0 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC14.54□□□□□ -0.08
TTC39BQ5VTQ0 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TTC39BQ5VTQ0 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC14.54□□□□□ -0.08
TTC39BQ5VTQ0 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TTC39BQ5VTQ0 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
TTC39BQ5VTQ0 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TTC39BQ5VTQ0 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC14.53□□□□□ -0.08
TTC39BQ5VTQ0 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TTC39BQ5VTQ0 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TTC39BQ5VTQ0 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TTC39BQ5VTQ0 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TTC39BQ5VTQ0 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TTC39BQ5VTQ0 STK25-235ENST00000543554 2556 ntTSL 2 BASIC14.53□□□□□ -0.08
TTC39BQ5VTQ0 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TTC39BQ5VTQ0 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TTC39BQ5VTQ0 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
TTC39BQ5VTQ0 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TTC39BQ5VTQ0 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TTC39BQ5VTQ0 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TTC39BQ5VTQ0 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
TTC39BQ5VTQ0 MARK2P9-201ENST00000430958 1727 ntBASIC14.53□□□□□ -0.08
TTC39BQ5VTQ0 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
TTC39BQ5VTQ0 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC14.53□□□□□ -0.08
TTC39BQ5VTQ0 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TTC39BQ5VTQ0 AC004554.1-201ENST00000422830 1468 ntBASIC14.53□□□□□ -0.08
TTC39BQ5VTQ0 MEX3B-202ENST00000558133 4333 ntBASIC14.53□□□□□ -0.08
TTC39BQ5VTQ0 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
TTC39BQ5VTQ0 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC14.53□□□□□ -0.08
TTC39BQ5VTQ0 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC14.53□□□□□ -0.08
TTC39BQ5VTQ0 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TTC39BQ5VTQ0 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TTC39BQ5VTQ0 UFM1-202ENST00000379649 846 ntTSL 4 BASIC14.53□□□□□ -0.08
TTC39BQ5VTQ0 APOBEC3H-202ENST00000401756 1023 ntAPPRIS ALT2 TSL 3 BASIC14.53□□□□□ -0.08
TTC39BQ5VTQ0 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC14.53□□□□□ -0.08
TTC39BQ5VTQ0 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC14.53□□□□□ -0.08
TTC39BQ5VTQ0 NDUFS6P1-201ENST00000485187 316 ntBASIC14.53□□□□□ -0.08
TTC39BQ5VTQ0 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TTC39BQ5VTQ0 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC14.53□□□□□ -0.08
TTC39BQ5VTQ0 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC14.53□□□□□ -0.08
TTC39BQ5VTQ0 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC14.53□□□□□ -0.08
TTC39BQ5VTQ0 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
TTC39BQ5VTQ0 AC138701.2-201ENST00000553634 226 ntBASIC14.53□□□□□ -0.08
TTC39BQ5VTQ0 AL031713.1-201ENST00000564813 661 ntBASIC14.53□□□□□ -0.08
TTC39BQ5VTQ0 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC14.53□□□□□ -0.08
TTC39BQ5VTQ0 RN7SL455P-201ENST00000580629 282 ntBASIC14.53□□□□□ -0.08
TTC39BQ5VTQ0 AC016629.1-201ENST00000596579 586 ntBASIC14.53□□□□□ -0.08
TTC39BQ5VTQ0 AC084346.2-201ENST00000607097 949 ntBASIC14.53□□□□□ -0.08
TTC39BQ5VTQ0 TP53-221ENST00000615910 1149 ntTSL 5 BASIC14.53□□□□□ -0.08
TTC39BQ5VTQ0 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TTC39BQ5VTQ0 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TTC39BQ5VTQ0 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
TTC39BQ5VTQ0 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TTC39BQ5VTQ0 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC14.53□□□□□ -0.08
TTC39BQ5VTQ0 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TTC39BQ5VTQ0 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TTC39BQ5VTQ0 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TTC39BQ5VTQ0 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TTC39BQ5VTQ0 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TTC39BQ5VTQ0 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC14.53□□□□□ -0.08
TTC39BQ5VTQ0 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TTC39BQ5VTQ0 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TTC39BQ5VTQ0 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TTC39BQ5VTQ0 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
TTC39BQ5VTQ0 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TTC39BQ5VTQ0 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TTC39BQ5VTQ0 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC14.53□□□□□ -0.08
TTC39BQ5VTQ0 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TTC39BQ5VTQ0 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TTC39BQ5VTQ0 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
TTC39BQ5VTQ0 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
TTC39BQ5VTQ0 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
TTC39BQ5VTQ0 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC14.52□□□□□ -0.08
TTC39BQ5VTQ0 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC14.52□□□□□ -0.08
TTC39BQ5VTQ0 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
TTC39BQ5VTQ0 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TTC39BQ5VTQ0 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC14.52□□□□□ -0.08
TTC39BQ5VTQ0 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
TTC39BQ5VTQ0 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC14.52□□□□□ -0.08
TTC39BQ5VTQ0 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
TTC39BQ5VTQ0 HLA-DQB1-202ENST00000399079 1501 ntBASIC14.52□□□□□ -0.08
TTC39BQ5VTQ0 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
TTC39BQ5VTQ0 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TTC39BQ5VTQ0 PCDHA5-203ENST00000614258 4248 ntBASIC14.52□□□□□ -0.08
TTC39BQ5VTQ0 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC14.52□□□□□ -0.08
TTC39BQ5VTQ0 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TTC39BQ5VTQ0 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TTC39BQ5VTQ0 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TTC39BQ5VTQ0 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
TTC39BQ5VTQ0 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TTC39BQ5VTQ0 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms