Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 SKAP1-208ENST00000584924 1477 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
RIF1Q5UIP0 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
RIF1Q5UIP0 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC13.21□□□□□ -0.3
RIF1Q5UIP0 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RIF1Q5UIP0 AC105415.1-201ENST00000509015 1416 ntTSL 2 BASIC13.21□□□□□ -0.3
RIF1Q5UIP0 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
RIF1Q5UIP0 ATF4P4-201ENST00000393544 1930 ntBASIC13.2□□□□□ -0.3
RIF1Q5UIP0 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RIF1Q5UIP0 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RIF1Q5UIP0 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RIF1Q5UIP0 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
RIF1Q5UIP0 APOC2-201ENST00000252490 727 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
RIF1Q5UIP0 CLDN10-AS1-201ENST00000416909 895 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RIF1Q5UIP0 EEF1GP3-201ENST00000421044 1288 ntBASIC13.2□□□□□ -0.3
RIF1Q5UIP0 TMEM256P1-201ENST00000430550 340 ntBASIC13.2□□□□□ -0.3
RIF1Q5UIP0 HLA-DRB9-201ENST00000449413 343 ntBASIC13.2□□□□□ -0.3
RIF1Q5UIP0 TULP3P1-202ENST00000453253 1291 ntBASIC13.2□□□□□ -0.3
RIF1Q5UIP0 RPSAP5-201ENST00000485258 884 ntBASIC13.2□□□□□ -0.3
RIF1Q5UIP0 KRT16P1-202ENST00000577750 679 ntTSL 3 BASIC13.2□□□□□ -0.3
RIF1Q5UIP0 snoZ6.3-201ENST00000583496 76 ntBASIC13.2□□□□□ -0.3
RIF1Q5UIP0 AP005203.1-202ENST00000584204 561 ntTSL 4 BASIC13.2□□□□□ -0.3
RIF1Q5UIP0 TUBAP-201ENST00000425085 1352 ntBASIC13.2□□□□□ -0.3
RIF1Q5UIP0 TBC1D3P1-201ENST00000590047 1693 ntBASIC13.2□□□□□ -0.3
RIF1Q5UIP0 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
RIF1Q5UIP0 SLC26A5-203ENST00000354356 2686 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
RIF1Q5UIP0 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.2□□□□□ -0.3
RIF1Q5UIP0 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC13.2□□□□□ -0.3
RIF1Q5UIP0 LINC01115-202ENST00000621134 1519 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RIF1Q5UIP0 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RIF1Q5UIP0 TAGLN3-205ENST00000478951 1301 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RIF1Q5UIP0 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
RIF1Q5UIP0 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
RIF1Q5UIP0 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RIF1Q5UIP0 ZNF485-202ENST00000374435 2052 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RIF1Q5UIP0 FAM238C-202ENST00000639963 1787 ntTSL 2 BASIC13.2□□□□□ -0.3
RIF1Q5UIP0 AL590399.1-202ENST00000429818 1480 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RIF1Q5UIP0 AL512625.1-202ENST00000476224 1480 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RIF1Q5UIP0 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RIF1Q5UIP0 AC004884.1-201ENST00000393647 319 ntBASIC13.2□□□□□ -0.3
RIF1Q5UIP0 AL138885.2-201ENST00000420389 539 ntTSL 3 BASIC13.2□□□□□ -0.3
RIF1Q5UIP0 FLNC-AS1-201ENST00000469965 559 ntTSL 4 BASIC13.2□□□□□ -0.3
RIF1Q5UIP0 AC109466.1-201ENST00000517508 804 ntTSL 4 BASIC13.2□□□□□ -0.3
RIF1Q5UIP0 ANAPC15-209ENST00000538919 849 ntAPPRIS P3 TSL 3 BASIC13.2□□□□□ -0.3
RIF1Q5UIP0 RPL26-206ENST00000582556 763 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
RIF1Q5UIP0 CYP4F10P-201ENST00000589560 752 ntBASIC13.2□□□□□ -0.3
RIF1Q5UIP0 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC13.2□□□□□ -0.3
RIF1Q5UIP0 VWA3B-221ENST00000614454 1542 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RIF1Q5UIP0 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.2□□□□□ -0.3
RIF1Q5UIP0 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
RIF1Q5UIP0 ACE3P-201ENST00000423435 1973 ntBASIC13.2□□□□□ -0.3
RIF1Q5UIP0 LMX1A-203ENST00000367893 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RIF1Q5UIP0 FKBP4P1-201ENST00000507284 1347 ntBASIC13.2□□□□□ -0.3
RIF1Q5UIP0 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RIF1Q5UIP0 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RIF1Q5UIP0 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RIF1Q5UIP0 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RIF1Q5UIP0 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RIF1Q5UIP0 CCDC42-201ENST00000293845 1374 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
RIF1Q5UIP0 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC13.19□□□□□ -0.3
RIF1Q5UIP0 FXYD2-201ENST00000260287 513 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RIF1Q5UIP0 RNA5SP84-201ENST00000364740 107 ntBASIC13.19□□□□□ -0.3
RIF1Q5UIP0 POLR1C-202ENST00000372344 1119 ntTSL 5 BASIC13.19□□□□□ -0.3
RIF1Q5UIP0 FAM178B-201ENST00000393526 1004 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
RIF1Q5UIP0 GSTM2P1-201ENST00000405166 654 ntBASIC13.19□□□□□ -0.3
RIF1Q5UIP0 AC004112.1-201ENST00000431064 561 ntTSL 3 BASIC13.19□□□□□ -0.3
RIF1Q5UIP0 SMUG1-213ENST00000506595 712 ntTSL 5 BASIC13.19□□□□□ -0.3
RIF1Q5UIP0 AC005096.1-201ENST00000560499 622 ntTSL 3 BASIC13.19□□□□□ -0.3
RIF1Q5UIP0 AC116552.1-201ENST00000563243 733 ntTSL 3 BASIC13.19□□□□□ -0.3
RIF1Q5UIP0 LINC01996-201ENST00000573270 1273 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RIF1Q5UIP0 AC131274.3-201ENST00000578745 1271 ntBASIC13.19□□□□□ -0.3
RIF1Q5UIP0 CALM3-206ENST00000594523 540 ntTSL 4 BASIC13.19□□□□□ -0.3
RIF1Q5UIP0 AC244102.2-201ENST00000597568 955 ntBASIC13.19□□□□□ -0.3
RIF1Q5UIP0 TTC28-AS1_1.1-201ENST00000614690 162 ntBASIC13.19□□□□□ -0.3
RIF1Q5UIP0 AC010601.2-201ENST00000623060 774 ntBASIC13.19□□□□□ -0.3
RIF1Q5UIP0 AC020763.2-201ENST00000623155 1255 ntBASIC13.19□□□□□ -0.3
RIF1Q5UIP0 PIGA-209ENST00000634582 965 ntTSL 2 BASIC13.19□□□□□ -0.3
RIF1Q5UIP0 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RIF1Q5UIP0 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RIF1Q5UIP0 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
RIF1Q5UIP0 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RIF1Q5UIP0 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
RIF1Q5UIP0 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RIF1Q5UIP0 GUCY1A3-213ENST00000621234 1788 ntTSL 5 BASIC13.19□□□□□ -0.3
RIF1Q5UIP0 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
RIF1Q5UIP0 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RIF1Q5UIP0 TUBB4AP1-201ENST00000450755 1325 ntBASIC13.19□□□□□ -0.3
RIF1Q5UIP0 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RIF1Q5UIP0 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC13.19□□□□□ -0.3
RIF1Q5UIP0 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RIF1Q5UIP0 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
RIF1Q5UIP0 AC004554.2-201ENST00000634846 1893 ntTSL 5 BASIC13.19□□□□□ -0.3
RIF1Q5UIP0 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.19□□□□□ -0.3
RIF1Q5UIP0 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
RIF1Q5UIP0 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.19□□□□□ -0.3
RIF1Q5UIP0 WFDC2-202ENST00000339946 420 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RIF1Q5UIP0 MRPL55-213ENST00000366740 644 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
RIF1Q5UIP0 WFDC2-204ENST00000372676 614 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RIF1Q5UIP0 AL133517.1-201ENST00000413412 748 ntBASIC13.19□□□□□ -0.3
RIF1Q5UIP0 MKNK1-205ENST00000428112 1270 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
RIF1Q5UIP0 LINC02163-201ENST00000514769 574 ntTSL 4 BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms