Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SSBP1Q04837 ARHGEF1-203ENST00000354532 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
SSBP1Q04837 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
SSBP1Q04837 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SSBP1Q04837 COL3A1-201ENST00000304636 5543 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SSBP1Q04837 AC092028.1-202ENST00000641483 3547 ntBASIC11.78□□□□□ -0.52
SSBP1Q04837 AC092028.1-201ENST00000641781 3540 ntBASIC11.78□□□□□ -0.52
SSBP1Q04837 EFHD1-204ENST00000410095 1538 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SSBP1Q04837 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SSBP1Q04837 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SSBP1Q04837 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SSBP1Q04837 SNX21-203ENST00000372541 771 ntTSL 2 BASIC11.78□□□□□ -0.52
SSBP1Q04837 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
SSBP1Q04837 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SSBP1Q04837 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
SSBP1Q04837 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC11.78□□□□□ -0.52
SSBP1Q04837 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
SSBP1Q04837 AC112492.5-201ENST00000421897 457 ntBASIC11.78□□□□□ -0.52
SSBP1Q04837 HNRNPA1P40-201ENST00000426371 1278 ntBASIC11.78□□□□□ -0.52
SSBP1Q04837 ACTG1P3-201ENST00000431775 1114 ntBASIC11.78□□□□□ -0.52
SSBP1Q04837 DNAJB3-202ENST00000449667 1266 ntBASIC11.78□□□□□ -0.52
SSBP1Q04837 C3orf35-206ENST00000452017 513 ntAPPRIS P5 TSL 5 BASIC11.78□□□□□ -0.52
SSBP1Q04837 CHCHD2P2-201ENST00000503744 321 ntBASIC11.78□□□□□ -0.52
SSBP1Q04837 COX5BP1-201ENST00000507622 393 ntBASIC11.78□□□□□ -0.52
SSBP1Q04837 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SSBP1Q04837 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SSBP1Q04837 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
SSBP1Q04837 PGAM1P5-201ENST00000548011 764 ntBASIC11.78□□□□□ -0.52
SSBP1Q04837 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
SSBP1Q04837 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC11.78□□□□□ -0.52
SSBP1Q04837 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC11.78□□□□□ -0.52
SSBP1Q04837 AC079781.4-201ENST00000641908 219 ntBASIC11.78□□□□□ -0.52
SSBP1Q04837 PPP1R26P2-201ENST00000611403 3595 ntBASIC11.78□□□□□ -0.52
SSBP1Q04837 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SSBP1Q04837 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC11.78□□□□□ -0.52
SSBP1Q04837 SUPT20HL1-201ENST00000436466 2618 ntBASIC11.78□□□□□ -0.52
SSBP1Q04837 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC11.78□□□□□ -0.52
SSBP1Q04837 TTC4-201ENST00000371281 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SSBP1Q04837 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
SSBP1Q04837 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SSBP1Q04837 SYK-204ENST00000375754 5005 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
SSBP1Q04837 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
SSBP1Q04837 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
SSBP1Q04837 DPYSL2-206ENST00000523027 2130 ntTSL 2 BASIC11.78□□□□□ -0.52
SSBP1Q04837 CYP11B1-204ENST00000517471 1874 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SSBP1Q04837 PRAMEF25-201ENST00000614839 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SSBP1Q04837 PRAMEF26-201ENST00000624207 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SSBP1Q04837 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
SSBP1Q04837 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC11.78□□□□□ -0.52
SSBP1Q04837 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SSBP1Q04837 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SSBP1Q04837 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SSBP1Q04837 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SSBP1Q04837 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SSBP1Q04837 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SSBP1Q04837 STAT6-202ENST00000454075 3037 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
SSBP1Q04837 AC245140.2-201ENST00000624054 1939 ntBASIC11.78□□□□□ -0.52
SSBP1Q04837 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
SSBP1Q04837 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SSBP1Q04837 FAM90A17P-201ENST00000533716 1957 ntBASIC11.78□□□□□ -0.52
SSBP1Q04837 BAIAP3-207ENST00000562208 3663 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
SSBP1Q04837 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC11.77□□□□□ -0.52
SSBP1Q04837 LINC01815-202ENST00000641468 1409 ntBASIC11.77□□□□□ -0.52
SSBP1Q04837 COL6A2-204ENST00000409416 3430 ntTSL 5 BASIC11.77□□□□□ -0.52
SSBP1Q04837 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
SSBP1Q04837 MEP1A-201ENST00000230588 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
SSBP1Q04837 MSTO2P-201ENST00000314835 1709 ntBASIC11.77□□□□□ -0.52
SSBP1Q04837 ZSCAN32-202ENST00000396846 3173 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
SSBP1Q04837 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
SSBP1Q04837 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
SSBP1Q04837 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.52
SSBP1Q04837 AC020763.3-201ENST00000625095 2904 ntBASIC11.77□□□□□ -0.52
SSBP1Q04837 AC138150.2-201ENST00000589796 2053 ntTSL 2 BASIC11.77□□□□□ -0.52
SSBP1Q04837 CTAGE10P-201ENST00000318353 2408 ntBASIC11.77□□□□□ -0.52
SSBP1Q04837 CTAGE13P-201ENST00000416709 2446 ntBASIC11.77□□□□□ -0.52
SSBP1Q04837 ZYX-203ENST00000392910 2123 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.52
SSBP1Q04837 ADRA1A-210ENST00000519229 1838 ntTSL 5 BASIC11.77□□□□□ -0.52
SSBP1Q04837 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
SSBP1Q04837 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
SSBP1Q04837 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
SSBP1Q04837 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SSBP1Q04837 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
SSBP1Q04837 ZNF106-205ENST00000565611 5081 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SSBP1Q04837 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SSBP1Q04837 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
SSBP1Q04837 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
SSBP1Q04837 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SSBP1Q04837 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC11.77□□□□□ -0.53
SSBP1Q04837 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SSBP1Q04837 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SSBP1Q04837 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC11.77□□□□□ -0.53
SSBP1Q04837 RGS5-214ENST00000429865 754 ntTSL 3 BASIC11.77□□□□□ -0.53
SSBP1Q04837 AC092580.1-201ENST00000433998 658 ntBASIC11.77□□□□□ -0.53
SSBP1Q04837 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SSBP1Q04837 FAM58BP-201ENST00000439056 645 ntBASIC11.77□□□□□ -0.53
SSBP1Q04837 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC11.77□□□□□ -0.53
SSBP1Q04837 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC11.77□□□□□ -0.53
SSBP1Q04837 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC11.77□□□□□ -0.53
SSBP1Q04837 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC11.77□□□□□ -0.53
SSBP1Q04837 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC11.77□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms