Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CBX1P83916 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.47□□□□□ -0.09
CBX1P83916 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CBX1P83916 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.47□□□□□ -0.09
CBX1P83916 DUX4L47-201ENST00000566374 394 ntBASIC14.47□□□□□ -0.09
CBX1P83916 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
CBX1P83916 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CBX1P83916 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CBX1P83916 AC004877.2-201ENST00000623941 599 ntBASIC14.47□□□□□ -0.09
CBX1P83916 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC14.47□□□□□ -0.09
CBX1P83916 RNF24-202ENST00000358395 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CBX1P83916 ZNF423-201ENST00000262383 4578 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CBX1P83916 UCP3-201ENST00000314032 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CBX1P83916 ARSK-201ENST00000380009 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CBX1P83916 LOXHD1-204ENST00000398705 1824 ntTSL 2 BASIC14.47□□□□□ -0.09
CBX1P83916 PEG10-203ENST00000488574 2587 ntTSL 2 BASIC14.47□□□□□ -0.09
CBX1P83916 DCT-202ENST00000446125 2395 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CBX1P83916 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.47□□□□□ -0.09
CBX1P83916 AC009093.10-201ENST00000641956 1442 ntBASIC14.47□□□□□ -0.09
CBX1P83916 TPM3-223ENST00000611659 3149 ntTSL 3 BASIC14.47□□□□□ -0.09
CBX1P83916 ARHGEF9-218ENST00000624843 2154 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CBX1P83916 ZFYVE19-202ENST00000336455 1784 ntTSL 2 BASIC14.47□□□□□ -0.09
CBX1P83916 ZNF827-201ENST00000379448 4197 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
CBX1P83916 AVIL-201ENST00000257861 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CBX1P83916 FGFR1-208ENST00000397108 2870 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CBX1P83916 ANKMY1-201ENST00000272972 3228 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CBX1P83916 FAM84A-202ENST00000331243 3765 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
CBX1P83916 NFIX-201ENST00000358552 1727 ntTSL 5 BASIC14.46□□□□□ -0.09
CBX1P83916 ZNF530-201ENST00000332854 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CBX1P83916 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.46□□□□□ -0.09
CBX1P83916 AL031846.2-201ENST00000624656 3671 ntBASIC14.46□□□□□ -0.09
CBX1P83916 GBE1-201ENST00000429644 3461 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CBX1P83916 APLF-201ENST00000303795 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CBX1P83916 FP565260.1-201ENST00000617716 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CBX1P83916 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CBX1P83916 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC14.46□□□□□ -0.09
CBX1P83916 C8B-206ENST00000543257 2382 ntTSL 2 BASIC14.46□□□□□ -0.09
CBX1P83916 POLR1B-216ENST00000537335 4961 ntTSL 2 BASIC14.46□□□□□ -0.09
CBX1P83916 MARCH5-201ENST00000358935 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CBX1P83916 TBL1X-203ENST00000407597 5596 ntTSL 2 BASIC14.46□□□□□ -0.09
CBX1P83916 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
CBX1P83916 ERCC2-204ENST00000391945 4153 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CBX1P83916 EPS8L3-201ENST00000361852 2130 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CBX1P83916 ZNF75D-201ENST00000370764 2977 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
CBX1P83916 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC14.46□□□□□ -0.09
CBX1P83916 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CBX1P83916 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC14.46□□□□□ -0.09
CBX1P83916 AC097652.1-201ENST00000511385 2114 ntTSL 5 BASIC14.46□□□□□ -0.09
CBX1P83916 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC14.46□□□□□ -0.09
CBX1P83916 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC14.46□□□□□ -0.09
CBX1P83916 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.46□□□□□ -0.09
CBX1P83916 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CBX1P83916 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.46□□□□□ -0.09
CBX1P83916 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.46□□□□□ -0.09
CBX1P83916 TTLL13P-206ENST00000641754 2256 ntAPPRIS ALT2 BASIC14.46□□□□□ -0.09
CBX1P83916 PCDHGB2-201ENST00000522605 4602 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CBX1P83916 PTPN7-202ENST00000367279 3265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CBX1P83916 LINC01254-202ENST00000567609 1907 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CBX1P83916 FUT6-203ENST00000524754 2598 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CBX1P83916 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CBX1P83916 ATP2A1-201ENST00000357084 3532 ntTSL 2 BASIC14.46□□□□□ -0.1
CBX1P83916 LINC00303-201ENST00000367207 1891 ntTSL 2 BASIC14.46□□□□□ -0.1
CBX1P83916 CEP83-203ENST00000397809 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CBX1P83916 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CBX1P83916 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
CBX1P83916 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.46□□□□□ -0.1
CBX1P83916 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CBX1P83916 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
CBX1P83916 GAL3ST4-203ENST00000413800 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CBX1P83916 PRRC2A-202ENST00000376033 6893 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CBX1P83916 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC14.45□□□□□ -0.1
CBX1P83916 TMEM164-204ENST00000372073 5567 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
CBX1P83916 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CBX1P83916 AR-208ENST00000612452 10676 ntTSL 5 BASIC14.45□□□□□ -0.1
CBX1P83916 ARHGAP21-217ENST00000612832 5514 ntTSL 5 BASIC14.45□□□□□ -0.1
CBX1P83916 AC024560.1-201ENST00000424493 1471 ntTSL 3 BASIC14.45□□□□□ -0.1
CBX1P83916 AC015818.9-201ENST00000591705 4582 ntBASIC14.45□□□□□ -0.1
CBX1P83916 Z97205.2-201ENST00000564697 1639 ntBASIC14.45□□□□□ -0.1
CBX1P83916 USHBP1-201ENST00000252597 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CBX1P83916 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CBX1P83916 LAMB3-201ENST00000356082 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CBX1P83916 RNF34-203ENST00000392465 2051 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
CBX1P83916 TTC4-201ENST00000371281 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CBX1P83916 PHACTR3-205ENST00000395636 2372 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CBX1P83916 PANK2-206ENST00000497424 4815 ntTSL 2 BASIC14.45□□□□□ -0.1
CBX1P83916 FBXO5-201ENST00000229758 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CBX1P83916 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CBX1P83916 IL1R2-201ENST00000332549 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CBX1P83916 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CBX1P83916 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CBX1P83916 ARHGEF2-203ENST00000361247 4149 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
CBX1P83916 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CBX1P83916 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
CBX1P83916 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CBX1P83916 SPATA13-203ENST00000382108 8463 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CBX1P83916 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
CBX1P83916 LILRB1-202ENST00000396315 2157 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
CBX1P83916 SPDYE17-201ENST00000412399 783 ntBASIC14.45□□□□□ -0.1
CBX1P83916 AC026904.1-201ENST00000430626 3549 ntTSL 2 BASIC14.45□□□□□ -0.1
CBX1P83916 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms