Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
UBA52P62987 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
UBA52P62987 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
UBA52P62987 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
UBA52P62987 FXNP2-201ENST00000411625 547 ntBASIC12.14□□□□□ -0.47
UBA52P62987 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC12.14□□□□□ -0.47
UBA52P62987 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
UBA52P62987 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC12.14□□□□□ -0.47
UBA52P62987 SPTLC1P5-201ENST00000450718 252 ntBASIC12.14□□□□□ -0.47
UBA52P62987 MPRIPP1-201ENST00000452433 1089 ntBASIC12.14□□□□□ -0.47
UBA52P62987 RN7SL720P-201ENST00000488178 304 ntBASIC12.14□□□□□ -0.47
UBA52P62987 IMP3P2-201ENST00000489760 475 ntBASIC12.14□□□□□ -0.47
UBA52P62987 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC12.14□□□□□ -0.47
UBA52P62987 AC022616.1-201ENST00000518688 554 ntBASIC12.14□□□□□ -0.47
UBA52P62987 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
UBA52P62987 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
UBA52P62987 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
UBA52P62987 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
UBA52P62987 AC073413.1-201ENST00000603927 732 ntBASIC12.14□□□□□ -0.47
UBA52P62987 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC12.14□□□□□ -0.47
UBA52P62987 AC091544.8-201ENST00000619490 361 ntBASIC12.14□□□□□ -0.47
UBA52P62987 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC12.14□□□□□ -0.47
UBA52P62987 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
UBA52P62987 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC12.14□□□□□ -0.47
UBA52P62987 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
UBA52P62987 AC011481.3-201ENST00000623895 5594 ntBASIC12.14□□□□□ -0.47
UBA52P62987 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
UBA52P62987 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
UBA52P62987 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
UBA52P62987 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
UBA52P62987 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
UBA52P62987 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
UBA52P62987 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC12.14□□□□□ -0.47
UBA52P62987 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
UBA52P62987 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
UBA52P62987 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
UBA52P62987 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
UBA52P62987 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC12.14□□□□□ -0.47
UBA52P62987 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC12.14□□□□□ -0.47
UBA52P62987 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC12.14□□□□□ -0.47
UBA52P62987 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
UBA52P62987 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
UBA52P62987 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
UBA52P62987 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
UBA52P62987 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC12.13□□□□□ -0.47
UBA52P62987 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
UBA52P62987 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC12.13□□□□□ -0.47
UBA52P62987 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
UBA52P62987 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
UBA52P62987 TNRC18P1-201ENST00000502875 3650 ntBASIC12.13□□□□□ -0.47
UBA52P62987 MYADML-201ENST00000474610 2147 ntBASIC12.13□□□□□ -0.47
UBA52P62987 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
UBA52P62987 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC12.13□□□□□ -0.47
UBA52P62987 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
UBA52P62987 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC12.13□□□□□ -0.47
UBA52P62987 DYSF-203ENST00000409366 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
UBA52P62987 DYSF-205ENST00000409651 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
UBA52P62987 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
UBA52P62987 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC12.13□□□□□ -0.47
UBA52P62987 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
UBA52P62987 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
UBA52P62987 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC12.13□□□□□ -0.47
UBA52P62987 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
UBA52P62987 SMS-201ENST00000379404 1174 ntTSL 3 BASIC12.13□□□□□ -0.47
UBA52P62987 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
UBA52P62987 LSM5-207ENST00000410044 687 ntTSL 3 BASIC12.13□□□□□ -0.47
UBA52P62987 POM121L8P-201ENST00000417732 1281 ntBASIC12.13□□□□□ -0.47
UBA52P62987 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
UBA52P62987 RGS5-214ENST00000429865 754 ntTSL 3 BASIC12.13□□□□□ -0.47
UBA52P62987 EIF3FP3-201ENST00000434851 1086 ntBASIC12.13□□□□□ -0.47
UBA52P62987 POM121L9P-203ENST00000441984 1285 ntBASIC12.13□□□□□ -0.47
UBA52P62987 Z97180.1-201ENST00000445173 988 ntBASIC12.13□□□□□ -0.47
UBA52P62987 HIST2H2BB-201ENST00000449108 381 ntBASIC12.13□□□□□ -0.47
UBA52P62987 RN7SL11P-201ENST00000471305 293 ntBASIC12.13□□□□□ -0.47
UBA52P62987 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
UBA52P62987 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC12.13□□□□□ -0.47
UBA52P62987 AC005740.2-201ENST00000511085 419 ntBASIC12.13□□□□□ -0.47
UBA52P62987 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC12.13□□□□□ -0.47
UBA52P62987 SDHD-202ENST00000525291 790 ntTSL 3 BASIC12.13□□□□□ -0.47
UBA52P62987 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
UBA52P62987 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
UBA52P62987 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
UBA52P62987 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC12.13□□□□□ -0.47
UBA52P62987 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
UBA52P62987 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC12.13□□□□□ -0.47
UBA52P62987 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC12.13□□□□□ -0.47
UBA52P62987 AC097724.1-201ENST00000609581 426 ntBASIC12.13□□□□□ -0.47
UBA52P62987 MIR6727-201ENST00000620702 65 ntBASIC12.13□□□□□ -0.47
UBA52P62987 AP001002.3-201ENST00000623482 206 ntBASIC12.13□□□□□ -0.47
UBA52P62987 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
UBA52P62987 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
UBA52P62987 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
UBA52P62987 AKAP13-201ENST00000361243 9468 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
UBA52P62987 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
UBA52P62987 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
UBA52P62987 KIAA1614-202ENST00000367588 9654 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
UBA52P62987 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC12.13□□□□□ -0.47
UBA52P62987 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
UBA52P62987 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
UBA52P62987 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms