Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.96□□□□□ -0.17
AP1S1P61966 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.96□□□□□ -0.17
AP1S1P61966 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
AP1S1P61966 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
AP1S1P61966 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
AP1S1P61966 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.96□□□□□ -0.17
AP1S1P61966 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
AP1S1P61966 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
AP1S1P61966 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
AP1S1P61966 AC073869.1-201ENST00000415574 2762 ntBASIC13.96□□□□□ -0.17
AP1S1P61966 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
AP1S1P61966 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.96□□□□□ -0.17
AP1S1P61966 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
AP1S1P61966 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC13.96□□□□□ -0.17
AP1S1P61966 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC13.96□□□□□ -0.17
AP1S1P61966 AC073548.1-201ENST00000624088 1882 ntBASIC13.96□□□□□ -0.17
AP1S1P61966 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
AP1S1P61966 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
AP1S1P61966 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
AP1S1P61966 SSR4-202ENST00000370085 526 ntTSL 2 BASIC13.96□□□□□ -0.17
AP1S1P61966 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
AP1S1P61966 MIR33B-201ENST00000385104 96 ntBASIC13.96□□□□□ -0.17
AP1S1P61966 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
AP1S1P61966 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC13.96□□□□□ -0.17
AP1S1P61966 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC13.96□□□□□ -0.17
AP1S1P61966 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC13.96□□□□□ -0.17
AP1S1P61966 KRT18P62-201ENST00000446618 1287 ntBASIC13.96□□□□□ -0.17
AP1S1P61966 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC13.96□□□□□ -0.17
AP1S1P61966 RPS23-204ENST00000507980 836 ntTSL 2 BASIC13.96□□□□□ -0.17
AP1S1P61966 RNA5SP406-201ENST00000516106 112 ntBASIC13.96□□□□□ -0.17
AP1S1P61966 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC13.96□□□□□ -0.17
AP1S1P61966 TMCO5B-205ENST00000530020 894 ntBASIC13.96□□□□□ -0.17
AP1S1P61966 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
AP1S1P61966 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC13.96□□□□□ -0.17
AP1S1P61966 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC13.96□□□□□ -0.17
AP1S1P61966 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC13.96□□□□□ -0.17
AP1S1P61966 AC087045.2-201ENST00000606279 1003 ntBASIC13.96□□□□□ -0.17
AP1S1P61966 AC107464.3-201ENST00000609172 737 ntBASIC13.96□□□□□ -0.17
AP1S1P61966 MIR6842-201ENST00000612539 65 ntBASIC13.96□□□□□ -0.17
AP1S1P61966 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC13.96□□□□□ -0.17
AP1S1P61966 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
AP1S1P61966 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC13.96□□□□□ -0.17
AP1S1P61966 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
AP1S1P61966 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
AP1S1P61966 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC13.96□□□□□ -0.17
AP1S1P61966 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
AP1S1P61966 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
AP1S1P61966 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
AP1S1P61966 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
AP1S1P61966 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
AP1S1P61966 ZNF493-208ENST00000599461 1769 ntBASIC13.96□□□□□ -0.18
AP1S1P61966 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
AP1S1P61966 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC13.96□□□□□ -0.18
AP1S1P61966 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
AP1S1P61966 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.18
AP1S1P61966 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
AP1S1P61966 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP1S1P61966 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC13.95□□□□□ -0.18
AP1S1P61966 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
AP1S1P61966 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
AP1S1P61966 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP1S1P61966 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP1S1P61966 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP1S1P61966 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
AP1S1P61966 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
AP1S1P61966 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.95□□□□□ -0.18
AP1S1P61966 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
AP1S1P61966 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP1S1P61966 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
AP1S1P61966 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP1S1P61966 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
AP1S1P61966 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP1S1P61966 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
AP1S1P61966 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC13.95□□□□□ -0.18
AP1S1P61966 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
AP1S1P61966 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC13.95□□□□□ -0.18
AP1S1P61966 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC13.95□□□□□ -0.18
AP1S1P61966 AC092638.2-201ENST00000441105 947 ntBASIC13.95□□□□□ -0.18
AP1S1P61966 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC13.95□□□□□ -0.18
AP1S1P61966 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
AP1S1P61966 AC100858.1-201ENST00000514059 1228 ntBASIC13.95□□□□□ -0.18
AP1S1P61966 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC13.95□□□□□ -0.18
AP1S1P61966 AC135983.4-201ENST00000564116 1262 ntBASIC13.95□□□□□ -0.18
AP1S1P61966 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC13.95□□□□□ -0.18
AP1S1P61966 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC13.95□□□□□ -0.18
AP1S1P61966 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC13.95□□□□□ -0.18
AP1S1P61966 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.95□□□□□ -0.18
AP1S1P61966 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC13.95□□□□□ -0.18
AP1S1P61966 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
AP1S1P61966 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP1S1P61966 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
AP1S1P61966 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC13.95□□□□□ -0.18
AP1S1P61966 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP1S1P61966 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP1S1P61966 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
AP1S1P61966 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC13.95□□□□□ -0.18
AP1S1P61966 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
AP1S1P61966 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
AP1S1P61966 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
AP1S1P61966 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms