Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 KCNMA1-233ENST00000638351 3849 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
AP3S2P59780 PDP1-202ENST00000396200 4358 ntAPPRIS ALT1 TSL 4 BASIC11.99□□□□□ -0.49
AP3S2P59780 DIP2C-205ENST00000634311 4961 ntTSL 5 BASIC11.99□□□□□ -0.49
AP3S2P59780 SEMA6D-206ENST00000389428 5874 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
AP3S2P59780 SLFNL1-202ENST00000359345 4310 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
AP3S2P59780 FMNL1-202ENST00000331495 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
AP3S2P59780 IKZF1-206ENST00000359197 3487 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
AP3S2P59780 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC11.98□□□□□ -0.49
AP3S2P59780 RSPO2-201ENST00000276659 3111 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
AP3S2P59780 DPP9-214ENST00000598800 3098 ntTSL 5 BASIC11.98□□□□□ -0.49
AP3S2P59780 ZNF564-201ENST00000339282 2935 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
AP3S2P59780 ALDH1L1-205ENST00000452905 2758 ntTSL 2 BASIC11.98□□□□□ -0.49
AP3S2P59780 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
AP3S2P59780 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC11.98□□□□□ -0.49
AP3S2P59780 NUF2-201ENST00000271452 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
AP3S2P59780 AAAS-201ENST00000209873 1840 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
AP3S2P59780 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
AP3S2P59780 NDRG2-201ENST00000298684 1784 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
AP3S2P59780 FMO6P-201ENST00000236166 1620 ntBASIC11.98□□□□□ -0.49
AP3S2P59780 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
AP3S2P59780 NRXN1-233ENST00000630543 4500 ntTSL 5 BASIC11.98□□□□□ -0.49
AP3S2P59780 PARP15-205ENST00000483793 4439 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
AP3S2P59780 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
AP3S2P59780 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
AP3S2P59780 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
AP3S2P59780 SLC11A1-201ENST00000233202 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
AP3S2P59780 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
AP3S2P59780 CALY-202ENST00000368555 783 ntTSL 2 BASIC11.98□□□□□ -0.49
AP3S2P59780 BAD-202ENST00000394531 631 ntTSL 3 BASIC11.98□□□□□ -0.49
AP3S2P59780 TUBB2BP1-201ENST00000404155 871 ntBASIC11.98□□□□□ -0.49
AP3S2P59780 MIR1224-201ENST00000408193 85 ntBASIC11.98□□□□□ -0.49
AP3S2P59780 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC11.98□□□□□ -0.49
AP3S2P59780 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC11.98□□□□□ -0.49
AP3S2P59780 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC11.98□□□□□ -0.49
AP3S2P59780 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC11.98□□□□□ -0.49
AP3S2P59780 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC11.98□□□□□ -0.49
AP3S2P59780 AC135586.1-201ENST00000539323 574 ntBASIC11.98□□□□□ -0.49
AP3S2P59780 BAD-207ENST00000544785 525 ntTSL 3 BASIC11.98□□□□□ -0.49
AP3S2P59780 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC11.98□□□□□ -0.49
AP3S2P59780 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC11.98□□□□□ -0.49
AP3S2P59780 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC11.98□□□□□ -0.49
AP3S2P59780 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC11.98□□□□□ -0.49
AP3S2P59780 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
AP3S2P59780 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC11.98□□□□□ -0.49
AP3S2P59780 METTL26-214ENST00000614890 801 ntTSL 3 BASIC11.98□□□□□ -0.49
AP3S2P59780 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC11.98□□□□□ -0.49
AP3S2P59780 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
AP3S2P59780 MATN2-211ENST00000521689 3554 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
AP3S2P59780 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC11.98□□□□□ -0.49
AP3S2P59780 ATAD2-201ENST00000287394 5565 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
AP3S2P59780 ARHGEF1-203ENST00000354532 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
AP3S2P59780 TIAF1-201ENST00000359450 5337 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
AP3S2P59780 ELOVL6-201ENST00000302274 3090 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
AP3S2P59780 SLC13A4-201ENST00000354042 2897 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
AP3S2P59780 NR1H3-217ENST00000467728 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
AP3S2P59780 IPO7-201ENST00000379719 6191 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
AP3S2P59780 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
AP3S2P59780 LPO-204ENST00000543544 2350 ntTSL 2 BASIC11.98□□□□□ -0.49
AP3S2P59780 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC11.98□□□□□ -0.49
AP3S2P59780 ORMDL2-201ENST00000243045 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
AP3S2P59780 HPSE2-202ENST00000370549 2121 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
AP3S2P59780 VWA5B2-201ENST00000273794 3486 ntTSL 2 BASIC11.98□□□□□ -0.49
AP3S2P59780 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
AP3S2P59780 CCDC97-201ENST00000269967 3322 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
AP3S2P59780 AC092117.1-201ENST00000621230 3250 ntBASIC11.98□□□□□ -0.49
AP3S2P59780 NTRK2-208ENST00000395882 7111 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
AP3S2P59780 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
AP3S2P59780 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC11.97□□□□□ -0.49
AP3S2P59780 SLC1A2-208ENST00000606205 1890 ntTSL 2 BASIC11.97□□□□□ -0.49
AP3S2P59780 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC11.97□□□□□ -0.49
AP3S2P59780 TAOK2-201ENST00000279394 4246 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
AP3S2P59780 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
AP3S2P59780 LINC01993-201ENST00000374945 2934 ntTSL 2 BASIC11.97□□□□□ -0.49
AP3S2P59780 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
AP3S2P59780 CNTROB-203ENST00000565740 2783 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
AP3S2P59780 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
AP3S2P59780 CCDC144A-204ENST00000360524 5830 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
AP3S2P59780 COX18-201ENST00000295890 6846 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
AP3S2P59780 ACSF3-201ENST00000317447 3664 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
AP3S2P59780 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
AP3S2P59780 ZNF706-209ENST00000520347 3502 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
AP3S2P59780 ST5-201ENST00000313726 4507 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
AP3S2P59780 AREL1-201ENST00000356357 5456 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
AP3S2P59780 SLC5A10-201ENST00000317977 4436 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
AP3S2P59780 SV2A-202ENST00000369146 4416 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
AP3S2P59780 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
AP3S2P59780 ACER1-201ENST00000301452 1445 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
AP3S2P59780 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC11.97□□□□□ -0.49
AP3S2P59780 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC11.97□□□□□ -0.49
AP3S2P59780 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
AP3S2P59780 DSP-202ENST00000418664 7812 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
AP3S2P59780 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC11.97□□□□□ -0.49
AP3S2P59780 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
AP3S2P59780 CPN2-201ENST00000323830 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
AP3S2P59780 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
AP3S2P59780 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
AP3S2P59780 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
AP3S2P59780 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
AP3S2P59780 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC11.97□□□□□ -0.49
AP3S2P59780 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms