Protein–RNA interactions for Protein: P55201

BRPF1, Peregrin, humanhuman

Predicted RBP Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1P55201 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC17.65■□□□□ 0.42
BRPF1P55201 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
BRPF1P55201 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
BRPF1P55201 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
BRPF1P55201 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
BRPF1P55201 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
BRPF1P55201 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC17.64■□□□□ 0.42
BRPF1P55201 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
BRPF1P55201 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.42
BRPF1P55201 AC117503.4-201ENST00000623229 1418 ntBASIC17.64■□□□□ 0.42
BRPF1P55201 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
BRPF1P55201 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BRPF1P55201 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
BRPF1P55201 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
BRPF1P55201 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BRPF1P55201 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BRPF1P55201 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
BRPF1P55201 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
BRPF1P55201 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
BRPF1P55201 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
BRPF1P55201 RNVU1-8-201ENST00000364272 125 ntBASIC17.64■□□□□ 0.41
BRPF1P55201 SOD2-202ENST00000367054 815 ntTSL 2 BASIC17.64■□□□□ 0.41
BRPF1P55201 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC17.64■□□□□ 0.41
BRPF1P55201 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
BRPF1P55201 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC17.64■□□□□ 0.41
BRPF1P55201 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC17.64■□□□□ 0.41
BRPF1P55201 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC17.64■□□□□ 0.41
BRPF1P55201 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC17.64■□□□□ 0.41
BRPF1P55201 AC012158.2-201ENST00000536546 354 ntBASIC17.64■□□□□ 0.41
BRPF1P55201 MT3-203ENST00000565838 421 ntTSL 3 BASIC17.64■□□□□ 0.41
BRPF1P55201 RPL17P45-201ENST00000586289 509 ntBASIC17.64■□□□□ 0.41
BRPF1P55201 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BRPF1P55201 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
BRPF1P55201 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC17.64■□□□□ 0.41
BRPF1P55201 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
BRPF1P55201 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC17.64■□□□□ 0.41
BRPF1P55201 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
BRPF1P55201 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
BRPF1P55201 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BRPF1P55201 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC17.64■□□□□ 0.41
BRPF1P55201 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC17.64■□□□□ 0.41
BRPF1P55201 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
BRPF1P55201 TK2-221ENST00000620035 5060 ntTSL 2 BASIC17.64■□□□□ 0.41
BRPF1P55201 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BRPF1P55201 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
BRPF1P55201 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BRPF1P55201 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
BRPF1P55201 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BRPF1P55201 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
BRPF1P55201 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
BRPF1P55201 RNASE7-201ENST00000298690 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BRPF1P55201 KCP-203ENST00000610776 5108 ntTSL 5 BASIC17.63■□□□□ 0.41
BRPF1P55201 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
BRPF1P55201 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
BRPF1P55201 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
BRPF1P55201 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BRPF1P55201 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC17.63■□□□□ 0.41
BRPF1P55201 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BRPF1P55201 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BRPF1P55201 AL512430.1-201ENST00000392575 860 ntBASIC17.63■□□□□ 0.41
BRPF1P55201 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
BRPF1P55201 YIPF7-202ENST00000415895 1196 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
BRPF1P55201 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC17.63■□□□□ 0.41
BRPF1P55201 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC17.63■□□□□ 0.41
BRPF1P55201 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC17.63■□□□□ 0.41
BRPF1P55201 ALG1L6P-201ENST00000515248 758 ntBASIC17.63■□□□□ 0.41
BRPF1P55201 IGHV1-12-201ENST00000518307 205 ntBASIC17.63■□□□□ 0.41
BRPF1P55201 OR5BD1P-201ENST00000532527 817 ntBASIC17.63■□□□□ 0.41
BRPF1P55201 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
BRPF1P55201 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC17.63■□□□□ 0.41
BRPF1P55201 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC17.63■□□□□ 0.41
BRPF1P55201 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC17.63■□□□□ 0.41
BRPF1P55201 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BRPF1P55201 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC17.63■□□□□ 0.41
BRPF1P55201 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
BRPF1P55201 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC17.63■□□□□ 0.41
BRPF1P55201 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC17.63■□□□□ 0.41
BRPF1P55201 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
BRPF1P55201 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC17.63■□□□□ 0.41
BRPF1P55201 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BRPF1P55201 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
BRPF1P55201 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
BRPF1P55201 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BRPF1P55201 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC17.62■□□□□ 0.41
BRPF1P55201 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
BRPF1P55201 AC073862.5-201ENST00000624129 2027 ntBASIC17.62■□□□□ 0.41
BRPF1P55201 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
BRPF1P55201 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
BRPF1P55201 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
BRPF1P55201 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
BRPF1P55201 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
BRPF1P55201 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC17.62■□□□□ 0.41
BRPF1P55201 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
BRPF1P55201 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC17.62■□□□□ 0.41
BRPF1P55201 AC073210.1-201ENST00000414799 232 ntBASIC17.62■□□□□ 0.41
BRPF1P55201 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC17.62■□□□□ 0.41
BRPF1P55201 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
BRPF1P55201 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC17.62■□□□□ 0.41
BRPF1P55201 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
BRPF1P55201 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms