Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
APOC4P55056 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.77
APOC4P55056 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC10.21□□□□□ -0.77
APOC4P55056 AC005912.2-201ENST00000619492 2400 ntBASIC10.21□□□□□ -0.77
APOC4P55056 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
APOC4P55056 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
APOC4P55056 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
APOC4P55056 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
APOC4P55056 ACTBP14-201ENST00000411655 1089 ntBASIC10.21□□□□□ -0.77
APOC4P55056 AC012362.1-201ENST00000434906 739 ntBASIC10.21□□□□□ -0.77
APOC4P55056 GNG10P1-201ENST00000452289 199 ntBASIC10.21□□□□□ -0.77
APOC4P55056 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC10.21□□□□□ -0.77
APOC4P55056 AC008026.2-201ENST00000495438 348 ntBASIC10.21□□□□□ -0.77
APOC4P55056 AREG-202ENST00000502307 956 ntTSL 5 BASIC10.21□□□□□ -0.77
APOC4P55056 AC095040.1-201ENST00000513286 675 ntBASIC10.21□□□□□ -0.77
APOC4P55056 IGHV3-37-201ENST00000518544 340 ntBASIC10.21□□□□□ -0.77
APOC4P55056 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC10.21□□□□□ -0.77
APOC4P55056 NAA40-205ENST00000539656 577 ntTSL 4 BASIC10.21□□□□□ -0.77
APOC4P55056 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
APOC4P55056 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
APOC4P55056 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC10.21□□□□□ -0.77
APOC4P55056 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC10.21□□□□□ -0.77
APOC4P55056 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC10.21□□□□□ -0.77
APOC4P55056 AC138466.5-201ENST00000624002 808 ntBASIC10.21□□□□□ -0.77
APOC4P55056 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
APOC4P55056 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
APOC4P55056 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
APOC4P55056 FAM155A-201ENST00000375915 8503 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
APOC4P55056 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
APOC4P55056 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC10.21□□□□□ -0.78
APOC4P55056 LRRC57-201ENST00000323443 7351 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
APOC4P55056 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC10.21□□□□□ -0.78
APOC4P55056 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
APOC4P55056 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
APOC4P55056 MRVI1-216ENST00000547195 6155 ntTSL 2 BASIC10.21□□□□□ -0.78
APOC4P55056 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC10.21□□□□□ -0.78
APOC4P55056 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC10.21□□□□□ -0.78
APOC4P55056 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
APOC4P55056 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.78
APOC4P55056 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
APOC4P55056 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC10.21□□□□□ -0.78
APOC4P55056 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
APOC4P55056 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
APOC4P55056 GOLGA8EP-201ENST00000530246 1959 ntBASIC10.21□□□□□ -0.78
APOC4P55056 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC10.21□□□□□ -0.78
APOC4P55056 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
APOC4P55056 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC10.21□□□□□ -0.78
APOC4P55056 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC10.21□□□□□ -0.78
APOC4P55056 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC10.21□□□□□ -0.78
APOC4P55056 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
APOC4P55056 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
APOC4P55056 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
APOC4P55056 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
APOC4P55056 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
APOC4P55056 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
APOC4P55056 FAHD2A-201ENST00000233379 4757 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
APOC4P55056 NUMA1-205ENST00000393695 7343 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
APOC4P55056 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
APOC4P55056 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC10.21□□□□□ -0.78
APOC4P55056 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC10.2□□□□□ -0.78
APOC4P55056 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
APOC4P55056 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
APOC4P55056 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC10.2□□□□□ -0.78
APOC4P55056 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC10.2□□□□□ -0.78
APOC4P55056 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC10.2□□□□□ -0.78
APOC4P55056 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
APOC4P55056 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
APOC4P55056 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
APOC4P55056 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
APOC4P55056 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC10.2□□□□□ -0.78
APOC4P55056 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
APOC4P55056 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
APOC4P55056 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
APOC4P55056 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
APOC4P55056 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
APOC4P55056 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
APOC4P55056 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
APOC4P55056 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
APOC4P55056 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
APOC4P55056 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
APOC4P55056 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
APOC4P55056 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
APOC4P55056 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC10.2□□□□□ -0.78
APOC4P55056 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
APOC4P55056 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC10.2□□□□□ -0.78
APOC4P55056 NME4-203ENST00000397722 1232 ntTSL 2 BASIC10.2□□□□□ -0.78
APOC4P55056 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
APOC4P55056 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC10.2□□□□□ -0.78
APOC4P55056 RPL3P2-204ENST00000413027 1203 ntBASIC10.2□□□□□ -0.78
APOC4P55056 OR52M2P-201ENST00000414298 959 ntBASIC10.2□□□□□ -0.78
APOC4P55056 CTBP2P8-201ENST00000422584 1330 ntBASIC10.2□□□□□ -0.78
APOC4P55056 PFN2-202ENST00000423691 911 ntTSL 2 BASIC10.2□□□□□ -0.78
APOC4P55056 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
APOC4P55056 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
APOC4P55056 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC10.2□□□□□ -0.78
APOC4P55056 MSANTD2P1-201ENST00000445341 1368 ntBASIC10.2□□□□□ -0.78
APOC4P55056 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC10.2□□□□□ -0.78
APOC4P55056 AC007952.4-201ENST00000573866 637 ntBASIC10.2□□□□□ -0.78
APOC4P55056 MIR4472-1-201ENST00000584349 80 ntBASIC10.2□□□□□ -0.78
APOC4P55056 AL049840.2-201ENST00000602722 535 ntBASIC10.2□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms