Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
MTHFRP42898 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
MTHFRP42898 SPATA21-202ENST00000375577 1136 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
MTHFRP42898 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC14.53□□□□□ -0.08
MTHFRP42898 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MTHFRP42898 KRT8P30-201ENST00000432100 650 ntBASIC14.53□□□□□ -0.08
MTHFRP42898 CDCA4P4-201ENST00000435216 680 ntBASIC14.53□□□□□ -0.08
MTHFRP42898 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC14.53□□□□□ -0.08
MTHFRP42898 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC14.53□□□□□ -0.08
MTHFRP42898 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC14.53□□□□□ -0.08
MTHFRP42898 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC14.53□□□□□ -0.08
MTHFRP42898 MIR2278-201ENST00000516344 96 ntBASIC14.53□□□□□ -0.08
MTHFRP42898 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC14.53□□□□□ -0.08
MTHFRP42898 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
MTHFRP42898 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.53□□□□□ -0.08
MTHFRP42898 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC14.53□□□□□ -0.08
MTHFRP42898 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC14.53□□□□□ -0.08
MTHFRP42898 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
MTHFRP42898 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC14.53□□□□□ -0.08
MTHFRP42898 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
MTHFRP42898 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MTHFRP42898 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
MTHFRP42898 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
MTHFRP42898 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
MTHFRP42898 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MTHFRP42898 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
MTHFRP42898 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
MTHFRP42898 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.53□□□□□ -0.08
MTHFRP42898 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.53□□□□□ -0.08
MTHFRP42898 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.53□□□□□ -0.08
MTHFRP42898 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
MTHFRP42898 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MTHFRP42898 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MTHFRP42898 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC14.53□□□□□ -0.08
MTHFRP42898 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
MTHFRP42898 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
MTHFRP42898 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
MTHFRP42898 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
MTHFRP42898 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
MTHFRP42898 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
MTHFRP42898 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
MTHFRP42898 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
MTHFRP42898 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC14.52□□□□□ -0.08
MTHFRP42898 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.08
MTHFRP42898 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
MTHFRP42898 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
MTHFRP42898 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
MTHFRP42898 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.52□□□□□ -0.08
MTHFRP42898 AL139158.3-201ENST00000641212 1562 ntBASIC14.52□□□□□ -0.08
MTHFRP42898 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
MTHFRP42898 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
MTHFRP42898 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
MTHFRP42898 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
MTHFRP42898 AC018529.2-202ENST00000611482 3087 ntBASIC14.52□□□□□ -0.08
MTHFRP42898 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
MTHFRP42898 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
MTHFRP42898 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
MTHFRP42898 RPL10-203ENST00000406022 748 ntTSL 3 BASIC14.52□□□□□ -0.09
MTHFRP42898 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC14.52□□□□□ -0.09
MTHFRP42898 IFNWP2-201ENST00000431203 580 ntBASIC14.52□□□□□ -0.09
MTHFRP42898 EEF1DP5-201ENST00000431410 772 ntBASIC14.52□□□□□ -0.09
MTHFRP42898 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
MTHFRP42898 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC14.52□□□□□ -0.09
MTHFRP42898 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC14.52□□□□□ -0.09
MTHFRP42898 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC14.52□□□□□ -0.09
MTHFRP42898 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC14.52□□□□□ -0.09
MTHFRP42898 MIR4254-201ENST00000581063 76 ntBASIC14.52□□□□□ -0.09
MTHFRP42898 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC14.52□□□□□ -0.09
MTHFRP42898 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC14.52□□□□□ -0.09
MTHFRP42898 AC126755.5-201ENST00000622756 267 ntBASIC14.52□□□□□ -0.09
MTHFRP42898 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.52□□□□□ -0.09
MTHFRP42898 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
MTHFRP42898 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC14.52□□□□□ -0.09
MTHFRP42898 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
MTHFRP42898 AC113367.3-201ENST00000508316 1912 ntBASIC14.52□□□□□ -0.09
MTHFRP42898 SARS-202ENST00000369923 1882 ntTSL 5 BASIC14.52□□□□□ -0.09
MTHFRP42898 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.52□□□□□ -0.09
MTHFRP42898 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
MTHFRP42898 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.52□□□□□ -0.09
MTHFRP42898 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
MTHFRP42898 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
MTHFRP42898 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
MTHFRP42898 AC010327.5-201ENST00000586923 3061 ntBASIC14.52□□□□□ -0.09
MTHFRP42898 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
MTHFRP42898 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
MTHFRP42898 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MTHFRP42898 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
MTHFRP42898 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MTHFRP42898 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
MTHFRP42898 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
MTHFRP42898 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.51□□□□□ -0.09
MTHFRP42898 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MTHFRP42898 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
MTHFRP42898 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MTHFRP42898 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
MTHFRP42898 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC14.51□□□□□ -0.09
MTHFRP42898 BEND3P1-201ENST00000421591 1944 ntBASIC14.51□□□□□ -0.09
MTHFRP42898 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.51□□□□□ -0.09
MTHFRP42898 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
MTHFRP42898 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms