Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDE6BP35913 PDCD6-201ENST00000264933 1135 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDE6BP35913 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDE6BP35913 SLC25A5-201ENST00000317881 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDE6BP35913 SULT1A3-201ENST00000338971 1097 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDE6BP35913 BCL2L11-203ENST00000357757 947 ntTSL 5 BASIC16.89■□□□□ 0.29
PDE6BP35913 S100A2-202ENST00000368708 998 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDE6BP35913 UCN3-201ENST00000380433 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDE6BP35913 MKNK1-205ENST00000428112 1270 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
PDE6BP35913 AC006328.1-201ENST00000437571 379 ntBASIC16.89■□□□□ 0.29
PDE6BP35913 B9D1-206ENST00000461069 923 ntTSL 2 BASIC16.89■□□□□ 0.29
PDE6BP35913 RN7SL846P-201ENST00000467429 292 ntBASIC16.89■□□□□ 0.29
PDE6BP35913 KIAA1191-210ENST00000510164 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDE6BP35913 AL512356.1-201ENST00000548203 535 ntTSL 3 BASIC16.89■□□□□ 0.29
PDE6BP35913 LINC00643-202ENST00000553426 526 ntTSL 3 BASIC16.89■□□□□ 0.29
PDE6BP35913 AL445363.2-201ENST00000554608 837 ntTSL 2 BASIC16.89■□□□□ 0.29
PDE6BP35913 AL139099.3-201ENST00000556657 401 ntTSL 3 BASIC16.89■□□□□ 0.29
PDE6BP35913 RBMX-209ENST00000565438 1292 ntTSL 5 BASIC16.89■□□□□ 0.29
PDE6BP35913 AP003071.1-201ENST00000567925 622 ntTSL 3 BASIC16.89■□□□□ 0.29
PDE6BP35913 AC007610.1-201ENST00000568130 498 ntTSL 3 BASIC16.89■□□□□ 0.29
PDE6BP35913 LINC01444-201ENST00000580867 764 ntTSL 2 BASIC16.89■□□□□ 0.29
PDE6BP35913 AC003070.1-201ENST00000592389 457 ntTSL 2 BASIC16.89■□□□□ 0.29
PDE6BP35913 LINC00969-241ENST00000600527 852 ntTSL 5 BASIC16.89■□□□□ 0.29
PDE6BP35913 LINC01588-216ENST00000623502 975 ntTSL 2 BASIC16.89■□□□□ 0.29
PDE6BP35913 AL445363.1-201ENST00000623749 952 ntTSL 2 BASIC16.89■□□□□ 0.29
PDE6BP35913 LINC00969-322ENST00000630170 584 ntTSL 5 BASIC16.89■□□□□ 0.29
PDE6BP35913 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDE6BP35913 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDE6BP35913 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC16.89■□□□□ 0.29
PDE6BP35913 ZSCAN21-203ENST00000456748 1904 ntTSL 5 BASIC16.89■□□□□ 0.29
PDE6BP35913 TMEM74B-201ENST00000381894 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDE6BP35913 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDE6BP35913 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PDE6BP35913 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDE6BP35913 CKAP2-202ENST00000378034 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDE6BP35913 GOLGA8EP-201ENST00000530246 1959 ntBASIC16.89■□□□□ 0.29
PDE6BP35913 PPP1R26P4-201ENST00000619065 3527 ntBASIC16.89■□□□□ 0.29
PDE6BP35913 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDE6BP35913 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
PDE6BP35913 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
PDE6BP35913 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDE6BP35913 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC16.89■□□□□ 0.29
PDE6BP35913 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PDE6BP35913 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDE6BP35913 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PDE6BP35913 FMO6P-201ENST00000236166 1620 ntBASIC16.88■□□□□ 0.29
PDE6BP35913 GTF2A1L-201ENST00000403751 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDE6BP35913 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDE6BP35913 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDE6BP35913 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
PDE6BP35913 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
PDE6BP35913 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PDE6BP35913 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC16.88■□□□□ 0.29
PDE6BP35913 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
PDE6BP35913 AC020910.6-201ENST00000623084 1459 ntBASIC16.88■□□□□ 0.29
PDE6BP35913 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC16.88■□□□□ 0.29
PDE6BP35913 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PDE6BP35913 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDE6BP35913 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.88■□□□□ 0.29
PDE6BP35913 SNRPN-205ENST00000400100 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDE6BP35913 FXYD2-202ENST00000292079 571 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PDE6BP35913 GAST-201ENST00000329402 470 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDE6BP35913 CASP2-203ENST00000392925 616 ntTSL 3 BASIC16.88■□□□□ 0.29
PDE6BP35913 SNORA50D-201ENST00000408059 134 ntBASIC16.88■□□□□ 0.29
PDE6BP35913 TISP43-202ENST00000409982 1039 ntAPPRIS P5 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDE6BP35913 AC008440.1-201ENST00000455835 439 ntTSL 5 BASIC16.88■□□□□ 0.29
PDE6BP35913 IMMP1L-213ENST00000533642 314 ntTSL 2 BASIC16.88■□□□□ 0.29
PDE6BP35913 MSRB1-205ENST00000564908 550 ntTSL 3 BASIC16.88■□□□□ 0.29
PDE6BP35913 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC16.88■□□□□ 0.29
PDE6BP35913 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
PDE6BP35913 AC254633.1-201ENST00000606790 345 ntBASIC16.88■□□□□ 0.29
PDE6BP35913 AP003900.1-201ENST00000622592 859 ntTSL 3 BASIC16.88■□□□□ 0.29
PDE6BP35913 SNORA50D-202ENST00000627561 132 ntBASIC16.88■□□□□ 0.29
PDE6BP35913 AL590556.2-202ENST00000636906 844 ntBASIC16.88■□□□□ 0.29
PDE6BP35913 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC16.88■□□□□ 0.29
PDE6BP35913 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDE6BP35913 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
PDE6BP35913 CLEC10A-206ENST00000576617 1800 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PDE6BP35913 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PDE6BP35913 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
PDE6BP35913 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PDE6BP35913 TRIB1-203ENST00000520847 1332 ntTSL 2 BASIC16.88■□□□□ 0.29
PDE6BP35913 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PDE6BP35913 OS9-207ENST00000439210 1946 ntTSL 2 BASIC16.88■□□□□ 0.29
PDE6BP35913 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PDE6BP35913 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
PDE6BP35913 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PDE6BP35913 CA2-201ENST00000285379 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDE6BP35913 RCC2P5-201ENST00000492126 1487 ntBASIC16.87■□□□□ 0.29
PDE6BP35913 AC024075.2-201ENST00000598112 1473 ntBASIC16.87■□□□□ 0.29
PDE6BP35913 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
PDE6BP35913 XRN1-203ENST00000463916 2075 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PDE6BP35913 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
PDE6BP35913 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
PDE6BP35913 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PDE6BP35913 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PDE6BP35913 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDE6BP35913 AC079781.5-202ENST00000641784 3743 ntBASIC16.87■□□□□ 0.29
PDE6BP35913 IGLV3-9-201ENST00000390316 461 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
PDE6BP35913 PYM1-203ENST00000408946 1226 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms