Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 AC004554.2-201ENST00000634846 1893 ntTSL 5 BASIC18.92■□□□□ 0.62
CPS1P31327 GSTM2P1-201ENST00000405166 654 ntBASIC18.92■□□□□ 0.62
CPS1P31327 SATB2-AS1-202ENST00000441234 468 ntTSL 3 BASIC18.92■□□□□ 0.62
CPS1P31327 WASIR2-201ENST00000527434 1054 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CPS1P31327 DSCR9-203ENST00000581640 472 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CPS1P31327 AC091736.1-201ENST00000609370 305 ntBASIC18.92■□□□□ 0.62
CPS1P31327 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CPS1P31327 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CPS1P31327 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CPS1P31327 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.92■□□□□ 0.62
CPS1P31327 AC020763.3-201ENST00000625095 2904 ntBASIC18.92■□□□□ 0.62
CPS1P31327 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CPS1P31327 ZNF577-202ENST00000451628 1771 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
CPS1P31327 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC18.92■□□□□ 0.62
CPS1P31327 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC18.92■□□□□ 0.62
CPS1P31327 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CPS1P31327 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
CPS1P31327 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CPS1P31327 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CPS1P31327 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC18.92■□□□□ 0.62
CPS1P31327 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC18.92■□□□□ 0.62
CPS1P31327 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC18.92■□□□□ 0.62
CPS1P31327 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC18.91■□□□□ 0.62
CPS1P31327 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC18.91■□□□□ 0.62
CPS1P31327 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CPS1P31327 HFE-205ENST00000352392 653 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CPS1P31327 LINC00700-202ENST00000438372 777 ntTSL 5 BASIC18.91■□□□□ 0.62
CPS1P31327 RN7SL111P-201ENST00000468841 285 ntBASIC18.91■□□□□ 0.62
CPS1P31327 AL121790.2-201ENST00000553425 379 ntTSL 4 BASIC18.91■□□□□ 0.62
CPS1P31327 AC013472.3-201ENST00000607407 659 ntBASIC18.91■□□□□ 0.62
CPS1P31327 ZNF674-AS1-202ENST00000609887 672 ntTSL 5 BASIC18.91■□□□□ 0.62
CPS1P31327 LINC00869-208ENST00000621156 737 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CPS1P31327 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC18.91■□□□□ 0.62
CPS1P31327 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPS1P31327 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPS1P31327 CCDC159-209ENST00000588790 1408 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CPS1P31327 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
CPS1P31327 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
CPS1P31327 ZCCHC9-203ENST00000407610 1555 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CPS1P31327 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CPS1P31327 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
CPS1P31327 COPS7A-201ENST00000229251 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPS1P31327 AC090340.1-201ENST00000620778 4980 ntBASIC18.91■□□□□ 0.62
CPS1P31327 PRMT5-202ENST00000324366 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPS1P31327 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPS1P31327 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPS1P31327 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CPS1P31327 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPS1P31327 HOPX-202ENST00000337881 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPS1P31327 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC18.91■□□□□ 0.62
CPS1P31327 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPS1P31327 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPS1P31327 ANAPC15-201ENST00000227618 886 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPS1P31327 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC18.9■□□□□ 0.62
CPS1P31327 PSAT1-201ENST00000347159 1411 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CPS1P31327 S100A6-202ENST00000368720 673 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
CPS1P31327 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPS1P31327 GEMIN8-203ENST00000398355 1119 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPS1P31327 MORN2-205ENST00000410014 750 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CPS1P31327 RPP30-203ENST00000413330 1004 ntTSL 5 BASIC18.9■□□□□ 0.62
CPS1P31327 EEF1GP3-201ENST00000421044 1288 ntBASIC18.9■□□□□ 0.62
CPS1P31327 RPE-208ENST00000436630 1128 ntTSL 2 BASIC18.9■□□□□ 0.62
CPS1P31327 OR2A15P-201ENST00000463814 900 ntBASIC18.9■□□□□ 0.62
CPS1P31327 RPL30P11-202ENST00000509114 358 ntTSL 3 BASIC18.9■□□□□ 0.62
CPS1P31327 AP003108.1-201ENST00000534856 554 ntTSL 4 BASIC18.9■□□□□ 0.62
CPS1P31327 AC063924.1-201ENST00000546680 673 ntBASIC18.9■□□□□ 0.62
CPS1P31327 RN7SL322P-201ENST00000583519 299 ntBASIC18.9■□□□□ 0.62
CPS1P31327 MXRA7-204ENST00000585519 540 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CPS1P31327 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC18.9■□□□□ 0.62
CPS1P31327 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPS1P31327 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CPS1P31327 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPS1P31327 AL031587.5-201ENST00000624344 1849 ntBASIC18.9■□□□□ 0.62
CPS1P31327 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPS1P31327 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPS1P31327 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPS1P31327 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPS1P31327 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPS1P31327 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC18.9■□□□□ 0.62
CPS1P31327 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPS1P31327 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPS1P31327 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CPS1P31327 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CPS1P31327 TRAF4-202ENST00000262396 683 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CPS1P31327 MYL1-202ENST00000352451 1065 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CPS1P31327 NRSN1-201ENST00000378475 800 ntTSL 3 BASIC18.9■□□□□ 0.62
CPS1P31327 LINC02344-201ENST00000443576 644 ntTSL 2 BASIC18.9■□□□□ 0.62
CPS1P31327 RAB34-211ENST00000450529 1184 ntTSL 2 BASIC18.9■□□□□ 0.62
CPS1P31327 GIMD1-201ENST00000507153 654 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CPS1P31327 BMF-209ENST00000561282 747 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPS1P31327 AP003096.1-201ENST00000565199 503 ntTSL 3 BASIC18.9■□□□□ 0.62
CPS1P31327 FAM90A28P-201ENST00000596881 489 ntTSL 5 BASIC18.9■□□□□ 0.62
CPS1P31327 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
CPS1P31327 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CPS1P31327 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CPS1P31327 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC18.89■□□□□ 0.62
CPS1P31327 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CPS1P31327 CASK-202ENST00000378158 3848 ntTSL 5 BASIC18.89■□□□□ 0.61
CPS1P31327 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CPS1P31327 CTNNBL1-203ENST00000373473 1493 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms