Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC13.85□□□□□ -0.19
VARSP26640 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
VARSP26640 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC13.85□□□□□ -0.19
VARSP26640 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VARSP26640 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
VARSP26640 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
VARSP26640 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
VARSP26640 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
VARSP26640 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC13.85□□□□□ -0.19
VARSP26640 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
VARSP26640 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
VARSP26640 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
VARSP26640 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC13.84□□□□□ -0.19
VARSP26640 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC13.84□□□□□ -0.19
VARSP26640 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC13.84□□□□□ -0.19
VARSP26640 HLA-E-201ENST00000376630 2601 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
VARSP26640 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VARSP26640 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
VARSP26640 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
VARSP26640 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VARSP26640 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
VARSP26640 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
VARSP26640 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC13.84□□□□□ -0.19
VARSP26640 DPM3-202ENST00000368399 517 ntBASIC13.84□□□□□ -0.19
VARSP26640 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VARSP26640 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
VARSP26640 CYP46A4P-201ENST00000414953 267 ntBASIC13.84□□□□□ -0.19
VARSP26640 DEF8-202ENST00000418391 852 ntTSL 2 BASIC13.84□□□□□ -0.19
VARSP26640 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC13.84□□□□□ -0.19
VARSP26640 PTPA-217ENST00000434095 870 ntTSL 2 BASIC13.84□□□□□ -0.19
VARSP26640 XBP1P1-201ENST00000436573 652 ntBASIC13.84□□□□□ -0.19
VARSP26640 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC13.84□□□□□ -0.19
VARSP26640 OARD1-204ENST00000464633 717 ntTSL 2 BASIC13.84□□□□□ -0.19
VARSP26640 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC13.84□□□□□ -0.19
VARSP26640 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC13.84□□□□□ -0.19
VARSP26640 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC13.84□□□□□ -0.19
VARSP26640 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC13.84□□□□□ -0.19
VARSP26640 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC13.84□□□□□ -0.19
VARSP26640 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
VARSP26640 AC008750.5-201ENST00000595500 473 ntTSL 2 BASIC13.84□□□□□ -0.19
VARSP26640 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC13.84□□□□□ -0.19
VARSP26640 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC13.84□□□□□ -0.19
VARSP26640 AL136295.7-201ENST00000619226 1200 ntBASIC13.84□□□□□ -0.19
VARSP26640 AL591471.1-201ENST00000621855 229 ntBASIC13.84□□□□□ -0.19
VARSP26640 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC13.84□□□□□ -0.19
VARSP26640 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VARSP26640 AC016738.1-201ENST00000452364 3485 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
VARSP26640 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VARSP26640 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC13.84□□□□□ -0.19
VARSP26640 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
VARSP26640 RAN-210ENST00000541630 1475 ntTSL 2 BASIC13.84□□□□□ -0.19
VARSP26640 METAP1-201ENST00000296411 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VARSP26640 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VARSP26640 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
VARSP26640 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC13.84□□□□□ -0.19
VARSP26640 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
VARSP26640 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC13.84□□□□□ -0.19
VARSP26640 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VARSP26640 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VARSP26640 AHCYP4-201ENST00000419201 1315 ntBASIC13.84□□□□□ -0.19
VARSP26640 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC13.84□□□□□ -0.19
VARSP26640 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC13.84□□□□□ -0.19
VARSP26640 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
VARSP26640 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
VARSP26640 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VARSP26640 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
VARSP26640 AP002353.1-201ENST00000528257 1599 ntBASIC13.83□□□□□ -0.19
VARSP26640 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC13.83□□□□□ -0.19
VARSP26640 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VARSP26640 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC13.83□□□□□ -0.2
VARSP26640 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
VARSP26640 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VARSP26640 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
VARSP26640 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VARSP26640 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
VARSP26640 AP000568.1-201ENST00000282964 442 ntBASIC13.83□□□□□ -0.2
VARSP26640 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VARSP26640 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VARSP26640 NPPA-201ENST00000376476 728 ntTSL 3 BASIC13.83□□□□□ -0.2
VARSP26640 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC13.83□□□□□ -0.2
VARSP26640 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
VARSP26640 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC13.83□□□□□ -0.2
VARSP26640 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC13.83□□□□□ -0.2
VARSP26640 AC092580.1-201ENST00000433998 658 ntBASIC13.83□□□□□ -0.2
VARSP26640 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC13.83□□□□□ -0.2
VARSP26640 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC13.83□□□□□ -0.2
VARSP26640 AC006335.1-201ENST00000445200 547 ntBASIC13.83□□□□□ -0.2
VARSP26640 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
VARSP26640 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC13.83□□□□□ -0.2
VARSP26640 ZNF331-218ENST00000513265 739 ntTSL 3 BASIC13.83□□□□□ -0.2
VARSP26640 AC044849.1-201ENST00000519737 1188 ntBASIC13.83□□□□□ -0.2
VARSP26640 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC13.83□□□□□ -0.2
VARSP26640 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC13.83□□□□□ -0.2
VARSP26640 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC13.83□□□□□ -0.2
VARSP26640 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
VARSP26640 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC13.83□□□□□ -0.2
VARSP26640 SNORD3B-2-202ENST00000571722 791 ntBASIC13.83□□□□□ -0.2
VARSP26640 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VARSP26640 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VARSP26640 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms