Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
CCL1P22362 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC11.94□□□□□ -0.5
CCL1P22362 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CCL1P22362 CLASP2-218ENST00000487200 1940 ntTSL 2 BASIC11.94□□□□□ -0.5
CCL1P22362 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC11.94□□□□□ -0.5
CCL1P22362 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
CCL1P22362 RC3H2-201ENST00000335387 3081 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CCL1P22362 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
CCL1P22362 CHMP4C-201ENST00000297265 1866 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CCL1P22362 KIR3DL1-203ENST00000391728 1871 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CCL1P22362 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC11.94□□□□□ -0.5
CCL1P22362 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
CCL1P22362 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CCL1P22362 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC11.94□□□□□ -0.5
CCL1P22362 AL627231.1-201ENST00000394467 1125 ntBASIC11.94□□□□□ -0.5
CCL1P22362 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC11.94□□□□□ -0.5
CCL1P22362 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC11.94□□□□□ -0.5
CCL1P22362 EEF1DP2-201ENST00000433698 843 ntBASIC11.94□□□□□ -0.5
CCL1P22362 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC11.94□□□□□ -0.5
CCL1P22362 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC11.94□□□□□ -0.5
CCL1P22362 AL596276.2-201ENST00000447525 331 ntBASIC11.94□□□□□ -0.5
CCL1P22362 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC11.94□□□□□ -0.5
CCL1P22362 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC11.94□□□□□ -0.5
CCL1P22362 IL2RG-204ENST00000456850 540 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CCL1P22362 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC11.94□□□□□ -0.5
CCL1P22362 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CCL1P22362 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC11.94□□□□□ -0.5
CCL1P22362 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC11.94□□□□□ -0.5
CCL1P22362 AC138649.2-201ENST00000615886 705 ntBASIC11.94□□□□□ -0.5
CCL1P22362 AC100757.4-201ENST00000626934 759 ntBASIC11.94□□□□□ -0.5
CCL1P22362 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CCL1P22362 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CCL1P22362 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CCL1P22362 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC11.94□□□□□ -0.5
CCL1P22362 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
CCL1P22362 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CCL1P22362 UBE2W-201ENST00000419880 2315 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CCL1P22362 GPN1-211ENST00000610189 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CCL1P22362 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CCL1P22362 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC11.94□□□□□ -0.5
CCL1P22362 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CCL1P22362 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CCL1P22362 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
CCL1P22362 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC11.94□□□□□ -0.5
CCL1P22362 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
CCL1P22362 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CCL1P22362 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CCL1P22362 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC11.94□□□□□ -0.5
CCL1P22362 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
CCL1P22362 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
CCL1P22362 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC11.94□□□□□ -0.5
CCL1P22362 HSPA8P9-201ENST00000485881 1943 ntBASIC11.94□□□□□ -0.5
CCL1P22362 AC012531.1-201ENST00000562848 2680 ntBASIC11.94□□□□□ -0.5
CCL1P22362 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
CCL1P22362 LINC00567-201ENST00000569854 3409 ntBASIC11.93□□□□□ -0.5
CCL1P22362 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CCL1P22362 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC11.93□□□□□ -0.5
CCL1P22362 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CCL1P22362 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
CCL1P22362 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CCL1P22362 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CCL1P22362 SECISBP2-201ENST00000339901 3320 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CCL1P22362 ALKBH1-201ENST00000216489 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CCL1P22362 OS9-206ENST00000435406 2346 ntTSL 2 BASIC11.93□□□□□ -0.5
CCL1P22362 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
CCL1P22362 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
CCL1P22362 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CCL1P22362 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
CCL1P22362 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CCL1P22362 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CCL1P22362 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC11.93□□□□□ -0.5
CCL1P22362 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC11.93□□□□□ -0.5
CCL1P22362 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CCL1P22362 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CCL1P22362 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
CCL1P22362 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CCL1P22362 CRCP-204ENST00000398684 492 ntTSL 2 BASIC11.93□□□□□ -0.5
CCL1P22362 GGTLC4P-201ENST00000402176 664 ntBASIC11.93□□□□□ -0.5
CCL1P22362 BANF1P3-201ENST00000412556 261 ntBASIC11.93□□□□□ -0.5
CCL1P22362 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC11.93□□□□□ -0.5
CCL1P22362 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CCL1P22362 NAGK-204ENST00000443872 878 ntTSL 3 BASIC11.93□□□□□ -0.5
CCL1P22362 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC11.93□□□□□ -0.5
CCL1P22362 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC11.93□□□□□ -0.5
CCL1P22362 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC11.93□□□□□ -0.5
CCL1P22362 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC11.93□□□□□ -0.5
CCL1P22362 NFATC2IP-206ENST00000568148 1157 ntTSL 2 BASIC11.93□□□□□ -0.5
CCL1P22362 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC11.93□□□□□ -0.5
CCL1P22362 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
CCL1P22362 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC11.93□□□□□ -0.5
CCL1P22362 AL451050.2-201ENST00000606967 682 ntBASIC11.93□□□□□ -0.5
CCL1P22362 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC11.93□□□□□ -0.5
CCL1P22362 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC11.93□□□□□ -0.5
CCL1P22362 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
CCL1P22362 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
CCL1P22362 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC11.93□□□□□ -0.5
CCL1P22362 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC11.93□□□□□ -0.5
CCL1P22362 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CCL1P22362 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CCL1P22362 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms