Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
PRKCAP17252 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PRKCAP17252 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PRKCAP17252 SUPT20HL1-201ENST00000436466 2618 ntBASIC13□□□□□ -0.33
PRKCAP17252 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PRKCAP17252 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PRKCAP17252 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC13□□□□□ -0.33
PRKCAP17252 FAM90A12P-201ENST00000519497 2375 ntBASIC13□□□□□ -0.33
PRKCAP17252 FAM90A24P-201ENST00000520792 2369 ntBASIC13□□□□□ -0.33
PRKCAP17252 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PRKCAP17252 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PRKCAP17252 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
PRKCAP17252 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
PRKCAP17252 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC13□□□□□ -0.33
PRKCAP17252 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PRKCAP17252 PERM1-202ENST00000433179 3340 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
PRKCAP17252 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC13□□□□□ -0.33
PRKCAP17252 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PRKCAP17252 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC12.99□□□□□ -0.33
PRKCAP17252 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PRKCAP17252 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
PRKCAP17252 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PRKCAP17252 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PRKCAP17252 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC12.99□□□□□ -0.33
PRKCAP17252 CLCNKB-202ENST00000375679 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PRKCAP17252 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PRKCAP17252 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
PRKCAP17252 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PRKCAP17252 ZNF200-205ENST00000431561 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
PRKCAP17252 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC12.99□□□□□ -0.33
PRKCAP17252 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PRKCAP17252 AC020907.1-201ENST00000616460 1350 ntBASIC12.99□□□□□ -0.33
PRKCAP17252 SFTPA1-202ENST00000419470 2210 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
PRKCAP17252 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC12.99□□□□□ -0.33
PRKCAP17252 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PRKCAP17252 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PRKCAP17252 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
PRKCAP17252 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PRKCAP17252 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
PRKCAP17252 GPAA1P2-201ENST00000417923 928 ntBASIC12.99□□□□□ -0.33
PRKCAP17252 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC12.99□□□□□ -0.33
PRKCAP17252 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC12.99□□□□□ -0.33
PRKCAP17252 MIR3188-201ENST00000583494 85 ntBASIC12.99□□□□□ -0.33
PRKCAP17252 BAP1-211ENST00000615113 489 ntBASIC12.99□□□□□ -0.33
PRKCAP17252 AC244452.3-201ENST00000636814 210 ntBASIC12.99□□□□□ -0.33
PRKCAP17252 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PRKCAP17252 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
PRKCAP17252 AC015819.3-201ENST00000624305 2674 ntBASIC12.99□□□□□ -0.33
PRKCAP17252 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC12.99□□□□□ -0.33
PRKCAP17252 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
PRKCAP17252 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PRKCAP17252 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PRKCAP17252 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC12.99□□□□□ -0.33
PRKCAP17252 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
PRKCAP17252 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
PRKCAP17252 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
PRKCAP17252 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PRKCAP17252 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC12.99□□□□□ -0.33
PRKCAP17252 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PRKCAP17252 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
PRKCAP17252 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PRKCAP17252 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PRKCAP17252 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
PRKCAP17252 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
PRKCAP17252 FGFR1-207ENST00000397103 2953 ntTSL 5 BASIC12.99□□□□□ -0.33
PRKCAP17252 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC12.98□□□□□ -0.33
PRKCAP17252 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PRKCAP17252 RBM15-205ENST00000618772 3431 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
PRKCAP17252 AC023794.5-201ENST00000564380 2157 ntBASIC12.98□□□□□ -0.33
PRKCAP17252 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC12.98□□□□□ -0.33
PRKCAP17252 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
PRKCAP17252 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PRKCAP17252 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
PRKCAP17252 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
PRKCAP17252 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
PRKCAP17252 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC12.98□□□□□ -0.33
PRKCAP17252 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PRKCAP17252 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
PRKCAP17252 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
PRKCAP17252 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PRKCAP17252 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PRKCAP17252 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
PRKCAP17252 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
PRKCAP17252 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
PRKCAP17252 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
PRKCAP17252 DCAF4-203ENST00000394234 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
PRKCAP17252 STK26-204ENST00000481105 1835 ntTSL 2 BASIC12.98□□□□□ -0.33
PRKCAP17252 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC12.98□□□□□ -0.33
PRKCAP17252 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
PRKCAP17252 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
PRKCAP17252 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC12.98□□□□□ -0.33
PRKCAP17252 BX284668.4-201ENST00000453917 508 ntBASIC12.98□□□□□ -0.33
PRKCAP17252 ARTN-209ENST00000479128 471 ntTSL 3 BASIC12.98□□□□□ -0.33
PRKCAP17252 AC099548.2-209ENST00000480264 625 ntBASIC12.98□□□□□ -0.33
PRKCAP17252 SCARNA20.5-201ENST00000516991 142 ntBASIC12.98□□□□□ -0.33
PRKCAP17252 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC12.98□□□□□ -0.33
PRKCAP17252 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC12.98□□□□□ -0.33
PRKCAP17252 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC12.98□□□□□ -0.33
PRKCAP17252 MAX-218ENST00000557746 571 ntTSL 4 BASIC12.98□□□□□ -0.33
PRKCAP17252 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms