Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC11.41□□□□□ -0.58
DEFA4P12838 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC11.41□□□□□ -0.58
DEFA4P12838 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC11.41□□□□□ -0.58
DEFA4P12838 AC104506.1-201ENST00000609247 429 ntBASIC11.41□□□□□ -0.58
DEFA4P12838 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC11.41□□□□□ -0.58
DEFA4P12838 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
DEFA4P12838 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
DEFA4P12838 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
DEFA4P12838 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC11.41□□□□□ -0.58
DEFA4P12838 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
DEFA4P12838 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC11.41□□□□□ -0.58
DEFA4P12838 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
DEFA4P12838 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
DEFA4P12838 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
DEFA4P12838 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
DEFA4P12838 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
DEFA4P12838 GOLGA8EP-201ENST00000530246 1959 ntBASIC11.41□□□□□ -0.58
DEFA4P12838 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
DEFA4P12838 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
DEFA4P12838 ESPL1-205ENST00000552462 6447 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
DEFA4P12838 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
DEFA4P12838 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
DEFA4P12838 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
DEFA4P12838 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
DEFA4P12838 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC11.41□□□□□ -0.58
DEFA4P12838 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC11.4□□□□□ -0.58
DEFA4P12838 PCDHGB1-201ENST00000523390 4590 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
DEFA4P12838 COX18-201ENST00000295890 6846 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
DEFA4P12838 AC063926.2-201ENST00000623766 1308 ntBASIC11.4□□□□□ -0.58
DEFA4P12838 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC11.4□□□□□ -0.58
DEFA4P12838 TP73-207ENST00000378290 1831 ntTSL 2 BASIC11.4□□□□□ -0.58
DEFA4P12838 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
DEFA4P12838 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
DEFA4P12838 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC11.4□□□□□ -0.58
DEFA4P12838 BCORL1-205ENST00000540052 7127 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
DEFA4P12838 SLC4A2-204ENST00000461735 4387 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
DEFA4P12838 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
DEFA4P12838 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
DEFA4P12838 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
DEFA4P12838 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
DEFA4P12838 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
DEFA4P12838 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
DEFA4P12838 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC11.4□□□□□ -0.58
DEFA4P12838 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC11.4□□□□□ -0.58
DEFA4P12838 MPV17-206ENST00000402722 827 ntTSL 3 BASIC11.4□□□□□ -0.58
DEFA4P12838 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC11.4□□□□□ -0.58
DEFA4P12838 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC11.4□□□□□ -0.58
DEFA4P12838 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC11.4□□□□□ -0.58
DEFA4P12838 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC11.4□□□□□ -0.58
DEFA4P12838 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC11.4□□□□□ -0.58
DEFA4P12838 AC012441.2-201ENST00000444843 739 ntBASIC11.4□□□□□ -0.58
DEFA4P12838 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC11.4□□□□□ -0.58
DEFA4P12838 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC11.4□□□□□ -0.58
DEFA4P12838 ACA64.2-201ENST00000459014 129 ntBASIC11.4□□□□□ -0.58
DEFA4P12838 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC11.4□□□□□ -0.58
DEFA4P12838 AC100850.1-201ENST00000506768 649 ntBASIC11.4□□□□□ -0.58
DEFA4P12838 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC11.4□□□□□ -0.58
DEFA4P12838 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC11.4□□□□□ -0.58
DEFA4P12838 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC11.4□□□□□ -0.58
DEFA4P12838 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
DEFA4P12838 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
DEFA4P12838 MIR4741-201ENST00000579822 90 ntBASIC11.4□□□□□ -0.58
DEFA4P12838 AC133552.6-201ENST00000613406 534 ntBASIC11.4□□□□□ -0.58
DEFA4P12838 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC11.4□□□□□ -0.58
DEFA4P12838 VPS54-203ENST00000409558 4337 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
DEFA4P12838 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
DEFA4P12838 BCL2L2-201ENST00000250405 3605 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
DEFA4P12838 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
DEFA4P12838 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC11.4□□□□□ -0.58
DEFA4P12838 AMT-239ENST00000636865 1914 ntTSL 5 BASIC11.4□□□□□ -0.58
DEFA4P12838 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
DEFA4P12838 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
DEFA4P12838 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
DEFA4P12838 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC11.4□□□□□ -0.58
DEFA4P12838 AL023775.1-201ENST00000454907 1746 ntBASIC11.4□□□□□ -0.58
DEFA4P12838 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
DEFA4P12838 MTMR2-201ENST00000346299 4681 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
DEFA4P12838 MTMR2-203ENST00000393223 4681 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
DEFA4P12838 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC11.4□□□□□ -0.58
DEFA4P12838 TRIM37-201ENST00000262294 4330 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
DEFA4P12838 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
DEFA4P12838 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
DEFA4P12838 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
DEFA4P12838 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
DEFA4P12838 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
DEFA4P12838 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
DEFA4P12838 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
DEFA4P12838 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC11.4□□□□□ -0.59
DEFA4P12838 ARHGEF10-205ENST00000518288 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
DEFA4P12838 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
DEFA4P12838 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
DEFA4P12838 FN1-202ENST00000336916 8435 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
DEFA4P12838 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC11.39□□□□□ -0.59
DEFA4P12838 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
DEFA4P12838 LOXHD1-210ENST00000536736 6848 ntAPPRIS P5 TSL 5 BASIC11.39□□□□□ -0.59
DEFA4P12838 AC244453.2-201ENST00000457996 3543 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
DEFA4P12838 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
DEFA4P12838 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
DEFA4P12838 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC11.39□□□□□ -0.59
DEFA4P12838 AL008718.2-201ENST00000609206 1313 ntBASIC11.39□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms