Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CD28P10747 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC10.92□□□□□ -0.66
CD28P10747 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
CD28P10747 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
CD28P10747 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
CD28P10747 USP17L6P-201ENST00000382470 1197 ntBASIC10.92□□□□□ -0.66
CD28P10747 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CD28P10747 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CD28P10747 AC092573.1-201ENST00000433054 884 ntBASIC10.92□□□□□ -0.66
CD28P10747 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC10.92□□□□□ -0.66
CD28P10747 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC10.92□□□□□ -0.66
CD28P10747 PGAM1P12-201ENST00000505622 748 ntBASIC10.92□□□□□ -0.66
CD28P10747 IGHV1-12-201ENST00000518307 205 ntBASIC10.92□□□□□ -0.66
CD28P10747 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC10.92□□□□□ -0.66
CD28P10747 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC10.92□□□□□ -0.66
CD28P10747 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC10.92□□□□□ -0.66
CD28P10747 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC10.92□□□□□ -0.66
CD28P10747 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC10.92□□□□□ -0.66
CD28P10747 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC10.92□□□□□ -0.66
CD28P10747 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC10.92□□□□□ -0.66
CD28P10747 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC10.92□□□□□ -0.66
CD28P10747 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CD28P10747 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC10.92□□□□□ -0.66
CD28P10747 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
CD28P10747 AC010976.2-201ENST00000609697 852 ntBASIC10.92□□□□□ -0.66
CD28P10747 AC091769.1-201ENST00000619576 568 ntBASIC10.92□□□□□ -0.66
CD28P10747 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC10.92□□□□□ -0.66
CD28P10747 PHB-210ENST00000511832 1509 ntTSL 2 BASIC10.92□□□□□ -0.66
CD28P10747 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CD28P10747 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC10.92□□□□□ -0.66
CD28P10747 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC10.92□□□□□ -0.66
CD28P10747 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
CD28P10747 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
CD28P10747 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
CD28P10747 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
CD28P10747 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CD28P10747 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CD28P10747 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC10.92□□□□□ -0.66
CD28P10747 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CD28P10747 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC10.92□□□□□ -0.66
CD28P10747 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
CD28P10747 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CD28P10747 AC138761.6-201ENST00000583997 1423 ntBASIC10.92□□□□□ -0.66
CD28P10747 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC10.91□□□□□ -0.66
CD28P10747 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
CD28P10747 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
CD28P10747 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
CD28P10747 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC10.91□□□□□ -0.66
CD28P10747 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
CD28P10747 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC10.91□□□□□ -0.66
CD28P10747 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CD28P10747 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC10.91□□□□□ -0.66
CD28P10747 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
CD28P10747 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CD28P10747 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CD28P10747 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
CD28P10747 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
CD28P10747 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
CD28P10747 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CD28P10747 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CD28P10747 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CD28P10747 OR7E115P-201ENST00000382617 1024 ntBASIC10.91□□□□□ -0.66
CD28P10747 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC10.91□□□□□ -0.66
CD28P10747 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC10.91□□□□□ -0.66
CD28P10747 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC10.91□□□□□ -0.66
CD28P10747 BCAS2P2-201ENST00000425064 674 ntBASIC10.91□□□□□ -0.66
CD28P10747 GCSHP3-201ENST00000431120 391 ntBASIC10.91□□□□□ -0.66
CD28P10747 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC10.91□□□□□ -0.66
CD28P10747 KRT18P15-201ENST00000458108 1291 ntBASIC10.91□□□□□ -0.66
CD28P10747 AC024293.1-201ENST00000467930 498 ntBASIC10.91□□□□□ -0.66
CD28P10747 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC10.91□□□□□ -0.66
CD28P10747 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC10.91□□□□□ -0.66
CD28P10747 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CD28P10747 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC10.91□□□□□ -0.66
CD28P10747 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC10.91□□□□□ -0.66
CD28P10747 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC10.91□□□□□ -0.66
CD28P10747 AC073592.2-201ENST00000623062 780 ntBASIC10.91□□□□□ -0.66
CD28P10747 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC10.91□□□□□ -0.66
CD28P10747 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
CD28P10747 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
CD28P10747 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
CD28P10747 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CD28P10747 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC10.91□□□□□ -0.66
CD28P10747 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CD28P10747 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
CD28P10747 SARS-202ENST00000369923 1882 ntTSL 5 BASIC10.91□□□□□ -0.66
CD28P10747 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CD28P10747 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
CD28P10747 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CD28P10747 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC10.91□□□□□ -0.66
CD28P10747 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CD28P10747 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CD28P10747 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CD28P10747 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
CD28P10747 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CD28P10747 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CD28P10747 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CD28P10747 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC10.9□□□□□ -0.66
CD28P10747 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC10.9□□□□□ -0.66
CD28P10747 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms