Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC13.09□□□□□ -0.31
CTSBP07858 AF013593.1-201ENST00000458074 1487 ntBASIC13.09□□□□□ -0.31
CTSBP07858 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC13.09□□□□□ -0.31
CTSBP07858 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CTSBP07858 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CTSBP07858 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CTSBP07858 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.09□□□□□ -0.31
CTSBP07858 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CTSBP07858 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CTSBP07858 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CTSBP07858 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC13.08□□□□□ -0.31
CTSBP07858 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CTSBP07858 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CTSBP07858 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC13.08□□□□□ -0.31
CTSBP07858 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.08□□□□□ -0.31
CTSBP07858 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CTSBP07858 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CTSBP07858 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
CTSBP07858 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC13.08□□□□□ -0.32
CTSBP07858 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CTSBP07858 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CTSBP07858 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CTSBP07858 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
CTSBP07858 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CTSBP07858 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC13.08□□□□□ -0.32
CTSBP07858 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CTSBP07858 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CTSBP07858 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC13.08□□□□□ -0.32
CTSBP07858 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CTSBP07858 RAB5A-203ENST00000422242 1443 ntTSL 2 BASIC13.08□□□□□ -0.32
CTSBP07858 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC13.08□□□□□ -0.32
CTSBP07858 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
CTSBP07858 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CTSBP07858 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CTSBP07858 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
CTSBP07858 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CTSBP07858 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CTSBP07858 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CTSBP07858 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CTSBP07858 AC097065.1-201ENST00000425737 517 ntBASIC13.08□□□□□ -0.32
CTSBP07858 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC13.08□□□□□ -0.32
CTSBP07858 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC13.08□□□□□ -0.32
CTSBP07858 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CTSBP07858 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC13.08□□□□□ -0.32
CTSBP07858 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC13.08□□□□□ -0.32
CTSBP07858 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CTSBP07858 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
CTSBP07858 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
CTSBP07858 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC13.08□□□□□ -0.32
CTSBP07858 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC13.08□□□□□ -0.32
CTSBP07858 MT2A-202ENST00000561491 581 ntTSL 2 BASIC13.08□□□□□ -0.32
CTSBP07858 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC13.08□□□□□ -0.32
CTSBP07858 JPT2-214ENST00000569765 782 ntTSL 2 BASIC13.08□□□□□ -0.32
CTSBP07858 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
CTSBP07858 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC13.08□□□□□ -0.32
CTSBP07858 AC010976.2-201ENST00000609697 852 ntBASIC13.08□□□□□ -0.32
CTSBP07858 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CTSBP07858 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
CTSBP07858 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC13.08□□□□□ -0.32
CTSBP07858 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CTSBP07858 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC13.08□□□□□ -0.32
CTSBP07858 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
CTSBP07858 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.08□□□□□ -0.32
CTSBP07858 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC13.08□□□□□ -0.32
CTSBP07858 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CTSBP07858 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CTSBP07858 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CTSBP07858 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CTSBP07858 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
CTSBP07858 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CTSBP07858 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CTSBP07858 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
CTSBP07858 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
CTSBP07858 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC13.08□□□□□ -0.32
CTSBP07858 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CTSBP07858 GPATCH2L-202ENST00000312858 2438 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
CTSBP07858 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.08□□□□□ -0.32
CTSBP07858 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CTSBP07858 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CTSBP07858 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC13.08□□□□□ -0.32
CTSBP07858 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CTSBP07858 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
CTSBP07858 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CTSBP07858 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CTSBP07858 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
CTSBP07858 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CTSBP07858 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
CTSBP07858 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CTSBP07858 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CTSBP07858 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC13.07□□□□□ -0.32
CTSBP07858 AC020917.4-201ENST00000623994 1999 ntBASIC13.07□□□□□ -0.32
CTSBP07858 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CTSBP07858 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CTSBP07858 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
CTSBP07858 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CTSBP07858 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CTSBP07858 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC13.07□□□□□ -0.32
CTSBP07858 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC13.07□□□□□ -0.32
CTSBP07858 PKD1P5-201ENST00000532415 10291 ntBASIC13.07□□□□□ -0.32
CTSBP07858 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms