Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RB1P06400 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RB1P06400 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
RB1P06400 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
RB1P06400 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.54□□□□□ -0.08
RB1P06400 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
RB1P06400 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RB1P06400 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
RB1P06400 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
RB1P06400 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RB1P06400 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.53□□□□□ -0.08
RB1P06400 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RB1P06400 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RB1P06400 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RB1P06400 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RB1P06400 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RB1P06400 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RB1P06400 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RB1P06400 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RB1P06400 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RB1P06400 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.53□□□□□ -0.08
RB1P06400 TUBAL3-201ENST00000380419 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RB1P06400 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RB1P06400 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RB1P06400 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
RB1P06400 TUBB4AP1-201ENST00000450755 1325 ntBASIC14.53□□□□□ -0.08
RB1P06400 FGF21-202ENST00000593756 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RB1P06400 FAU-201ENST00000279259 461 ntTSL 2 BASIC14.53□□□□□ -0.08
RB1P06400 CCL25-202ENST00000315626 450 ntTSL 2 BASIC14.53□□□□□ -0.08
RB1P06400 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC14.53□□□□□ -0.08
RB1P06400 PPP1R7-205ENST00000404405 1009 ntTSL 3 BASIC14.53□□□□□ -0.08
RB1P06400 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC14.53□□□□□ -0.08
RB1P06400 SAP18P2-201ENST00000434334 459 ntBASIC14.53□□□□□ -0.08
RB1P06400 AC092865.2-201ENST00000439409 971 ntBASIC14.53□□□□□ -0.08
RB1P06400 PLA2G15-203ENST00000444212 943 ntTSL 2 BASIC14.53□□□□□ -0.08
RB1P06400 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC14.53□□□□□ -0.08
RB1P06400 TGFBI-207ENST00000508076 1034 ntTSL 2 BASIC14.53□□□□□ -0.08
RB1P06400 ANAPC15-209ENST00000538919 849 ntAPPRIS P3 TSL 3 BASIC14.53□□□□□ -0.08
RB1P06400 SLC13A2-205ENST00000545060 1276 ntTSL 5 BASIC14.53□□□□□ -0.08
RB1P06400 C12orf73-204ENST00000546819 582 ntTSL 4 BASIC14.53□□□□□ -0.08
RB1P06400 DTWD1-205ENST00000558653 1131 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
RB1P06400 SHBG-217ENST00000576478 639 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RB1P06400 AC022098.2-201ENST00000590528 518 ntTSL 4 BASIC14.53□□□□□ -0.08
RB1P06400 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
RB1P06400 CSAG3-201ENST00000599845 844 ntAPPRIS P5 TSL 1 (best) BASIC14.53□□□□□ -0.08
RB1P06400 AC136475.7-201ENST00000602949 592 ntBASIC14.53□□□□□ -0.08
RB1P06400 AL080250.1-203ENST00000607799 747 ntTSL 2 BASIC14.53□□□□□ -0.08
RB1P06400 AC106782.5-201ENST00000616011 337 ntBASIC14.53□□□□□ -0.08
RB1P06400 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
RB1P06400 CSAG2-203ENST00000638741 844 ntAPPRIS P5 TSL 1 (best) BASIC14.53□□□□□ -0.08
RB1P06400 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
RB1P06400 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.53□□□□□ -0.08
RB1P06400 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RB1P06400 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RB1P06400 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RB1P06400 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.53□□□□□ -0.08
RB1P06400 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RB1P06400 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
RB1P06400 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RB1P06400 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RB1P06400 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RB1P06400 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
RB1P06400 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RB1P06400 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RB1P06400 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
RB1P06400 HSPA7-201ENST00000445535 1927 ntBASIC14.53□□□□□ -0.08
RB1P06400 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.52□□□□□ -0.08
RB1P06400 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RB1P06400 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
RB1P06400 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
RB1P06400 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.52□□□□□ -0.08
RB1P06400 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
RB1P06400 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
RB1P06400 AC040160.2-201ENST00000623816 1675 ntBASIC14.52□□□□□ -0.08
RB1P06400 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RB1P06400 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
RB1P06400 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RB1P06400 OSCP1-201ENST00000235532 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RB1P06400 OSCP1-203ENST00000356637 1463 ntTSL 5 BASIC14.52□□□□□ -0.08
RB1P06400 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RB1P06400 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
RB1P06400 C22orf42-201ENST00000382097 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RB1P06400 TTC23L-203ENST00000505624 1353 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
RB1P06400 TAGLN3-205ENST00000478951 1301 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RB1P06400 NRG1-211ENST00000520502 1330 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RB1P06400 AC008038.1-201ENST00000634247 1314 ntBASIC14.52□□□□□ -0.08
RB1P06400 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
RB1P06400 HSD3BP1-201ENST00000286193 1111 ntBASIC14.52□□□□□ -0.09
RB1P06400 LINC02449-201ENST00000304751 795 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RB1P06400 IL37-204ENST00000352179 709 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
RB1P06400 AC068631.1-228ENST00000354642 742 ntTSL 5 BASIC14.52□□□□□ -0.09
RB1P06400 LINC02026-202ENST00000414309 772 ntTSL 3 BASIC14.52□□□□□ -0.09
RB1P06400 TXNL4B-203ENST00000426362 965 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
RB1P06400 RBM14-205ENST00000443702 732 ntTSL 3 BASIC14.52□□□□□ -0.09
RB1P06400 AC005077.3-201ENST00000449614 213 ntBASIC14.52□□□□□ -0.09
RB1P06400 PRSS46-201ENST00000463091 982 ntAPPRIS P1 TSL 4 BASIC14.52□□□□□ -0.09
RB1P06400 UBE2D3-221ENST00000507845 577 ntTSL 4 BASIC14.52□□□□□ -0.09
RB1P06400 AP000640.1-201ENST00000525337 879 ntTSL 2 BASIC14.52□□□□□ -0.09
RB1P06400 AP003040.1-201ENST00000532044 1024 ntBASIC14.52□□□□□ -0.09
RB1P06400 METTL7AP1-201ENST00000547343 496 ntBASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms