Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 AC026336.4-201ENST00000624565 1050 ntBASIC15.14■□□□□ 0.01
VTNP04004 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
VTNP04004 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VTNP04004 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC15.14■□□□□ 0.01
VTNP04004 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
VTNP04004 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
VTNP04004 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
VTNP04004 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VTNP04004 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VTNP04004 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.14■□□□□ 0.01
VTNP04004 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.14■□□□□ 0.01
VTNP04004 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC15.13■□□□□ 0.01
VTNP04004 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
VTNP04004 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
VTNP04004 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
VTNP04004 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
VTNP04004 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
VTNP04004 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
VTNP04004 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
VTNP04004 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
VTNP04004 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
VTNP04004 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
VTNP04004 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
VTNP04004 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
VTNP04004 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
VTNP04004 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
VTNP04004 SURF4-203ENST00000371991 715 ntTSL 3 BASIC15.13■□□□□ 0.01
VTNP04004 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC15.13■□□□□ 0.01
VTNP04004 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
VTNP04004 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC15.13■□□□□ 0.01
VTNP04004 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
VTNP04004 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC15.13■□□□□ 0.01
VTNP04004 AC063952.3-201ENST00000467756 308 ntBASIC15.13■□□□□ 0.01
VTNP04004 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
VTNP04004 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
VTNP04004 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC15.13■□□□□ 0.01
VTNP04004 AC073869.4-201ENST00000620841 800 ntBASIC15.13■□□□□ 0.01
VTNP04004 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC15.13■□□□□ 0.01
VTNP04004 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC15.13■□□□□ 0.01
VTNP04004 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
VTNP04004 AL365209.1-201ENST00000624418 6473 ntBASIC15.13■□□□□ 0.01
VTNP04004 AC005014.1-201ENST00000432006 2976 ntBASIC15.13■□□□□ 0.01
VTNP04004 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC15.13■□□□□ 0.01
VTNP04004 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
VTNP04004 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
VTNP04004 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
VTNP04004 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
VTNP04004 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
VTNP04004 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
VTNP04004 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC15.13■□□□□ 0.01
VTNP04004 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
VTNP04004 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
VTNP04004 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
VTNP04004 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
VTNP04004 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
VTNP04004 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
VTNP04004 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
VTNP04004 AC007326.2-201ENST00000624224 7579 ntBASIC15.13■□□□□ 0.01
VTNP04004 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC15.12■□□□□ 0.01
VTNP04004 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC15.12■□□□□ 0.01
VTNP04004 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
VTNP04004 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
VTNP04004 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
VTNP04004 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
VTNP04004 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VTNP04004 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC15.12■□□□□ 0.01
VTNP04004 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VTNP04004 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC15.12■□□□□ 0.01
VTNP04004 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
VTNP04004 AC245140.2-201ENST00000624054 1939 ntBASIC15.12■□□□□ 0.01
VTNP04004 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VTNP04004 OR51A9P-201ENST00000422578 911 ntBASIC15.12■□□□□ 0.01
VTNP04004 HNRNPA1P2-207ENST00000432375 960 ntBASIC15.12■□□□□ 0.01
VTNP04004 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC15.12■□□□□ 0.01
VTNP04004 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC15.12■□□□□ 0.01
VTNP04004 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC15.12■□□□□ 0.01
VTNP04004 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
VTNP04004 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC15.12■□□□□ 0.01
VTNP04004 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC15.12■□□□□ 0.01
VTNP04004 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC15.12■□□□□ 0.01
VTNP04004 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC15.12■□□□□ 0.01
VTNP04004 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC15.12■□□□□ 0.01
VTNP04004 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
VTNP04004 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
VTNP04004 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC15.12■□□□□ 0.01
VTNP04004 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
VTNP04004 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC15.12■□□□□ 0.01
VTNP04004 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
VTNP04004 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
VTNP04004 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VTNP04004 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VTNP04004 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
VTNP04004 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
VTNP04004 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VTNP04004 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
VTNP04004 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
VTNP04004 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
VTNP04004 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC15.12■□□□□ 0.01
VTNP04004 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
VTNP04004 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms