Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 PTCD1-201ENST00000292478 5582 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-AP01891 HMBOX1-203ENST00000397358 4082 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-AP01891 ABL2-207ENST00000507173 3177 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-AP01891 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-AP01891 LRRN2-201ENST00000367175 5036 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
HLA-AP01891 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-AP01891 TMX1-201ENST00000457354 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-AP01891 SEPT9-203ENST00000427177 3821 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-AP01891 MOCS1-204ENST00000373188 3358 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-AP01891 KCNIP3-201ENST00000295225 2940 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-AP01891 DDX5-210ENST00000578804 2021 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-AP01891 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-AP01891 KRT15-202ENST00000393974 3758 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-AP01891 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC11.81□□□□□ -0.52
HLA-AP01891 SESN2-201ENST00000253063 3453 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-AP01891 BEND6-202ENST00000370746 2379 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
HLA-AP01891 LAS1L-202ENST00000374807 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-AP01891 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-AP01891 MAN2C1-242ENST00000569482 3177 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-AP01891 TXNDC17-201ENST00000250101 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-AP01891 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-AP01891 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-AP01891 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-AP01891 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-AP01891 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-AP01891 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-AP01891 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
HLA-AP01891 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
HLA-AP01891 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
HLA-AP01891 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC11.81□□□□□ -0.52
HLA-AP01891 PAM16-204ENST00000571941 674 ntTSL 3 BASIC11.81□□□□□ -0.52
HLA-AP01891 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC11.81□□□□□ -0.52
HLA-AP01891 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-AP01891 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC11.81□□□□□ -0.52
HLA-AP01891 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC11.81□□□□□ -0.52
HLA-AP01891 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC11.81□□□□□ -0.52
HLA-AP01891 CU634019.7-201ENST00000624153 1185 ntBASIC11.81□□□□□ -0.52
HLA-AP01891 FP236241.2-201ENST00000624906 1185 ntBASIC11.81□□□□□ -0.52
HLA-AP01891 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
HLA-AP01891 PAK3-211ENST00000518291 2098 ntTSL 5 BASIC11.81□□□□□ -0.52
HLA-AP01891 SLC13A4-201ENST00000354042 2897 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-AP01891 USP20-201ENST00000315480 4458 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-AP01891 PCDHA4-202ENST00000512229 4163 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-AP01891 SRGAP3-202ENST00000383836 8656 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-AP01891 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-AP01891 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-AP01891 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-AP01891 ZNF493-208ENST00000599461 1769 ntBASIC11.81□□□□□ -0.52
HLA-AP01891 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC11.81□□□□□ -0.52
HLA-AP01891 AC018445.4-201ENST00000624066 2291 ntBASIC11.81□□□□□ -0.52
HLA-AP01891 ADARB1-214ENST00000629643 4583 ntTSL 5 BASIC11.81□□□□□ -0.52
HLA-AP01891 AL031687.1-201ENST00000450586 2137 ntTSL 2 BASIC11.81□□□□□ -0.52
HLA-AP01891 SLC25A35-203ENST00000579192 2136 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-AP01891 AKNA-201ENST00000223791 4414 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
HLA-AP01891 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
HLA-AP01891 CEP78-205ENST00000424347 11198 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
HLA-AP01891 AC090114.2-201ENST00000608477 7054 ntBASIC11.81□□□□□ -0.52
HLA-AP01891 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-AP01891 AL590824.1-201ENST00000403828 1349 ntBASIC11.81□□□□□ -0.52
HLA-AP01891 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-AP01891 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-AP01891 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-AP01891 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC11.81□□□□□ -0.52
HLA-AP01891 HDAC8-207ENST00000373573 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-AP01891 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-AP01891 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC11.81□□□□□ -0.52
HLA-AP01891 LRPAP1-202ENST00000500728 7819 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HLA-AP01891 LAIR1-204ENST00000391743 2735 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
HLA-AP01891 SMG6-203ENST00000536871 1865 ntTSL 2 BASIC11.8□□□□□ -0.52
HLA-AP01891 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
HLA-AP01891 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
HLA-AP01891 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC11.8□□□□□ -0.52
HLA-AP01891 SHC1P1-201ENST00000425230 1745 ntBASIC11.8□□□□□ -0.52
HLA-AP01891 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
HLA-AP01891 LAS1L-201ENST00000374804 2261 ntTSL 2 BASIC11.8□□□□□ -0.52
HLA-AP01891 PXK-210ENST00000479241 2817 ntTSL 2 BASIC11.8□□□□□ -0.52
HLA-AP01891 PLB1-205ENST00000422425 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
HLA-AP01891 CAMKK2-205ENST00000392474 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
HLA-AP01891 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
HLA-AP01891 OGFR-202ENST00000370461 4506 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
HLA-AP01891 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
HLA-AP01891 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
HLA-AP01891 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC11.8□□□□□ -0.52
HLA-AP01891 PGGT1BP2-201ENST00000398621 1028 ntBASIC11.8□□□□□ -0.52
HLA-AP01891 RN7SKP175-201ENST00000408472 289 ntBASIC11.8□□□□□ -0.52
HLA-AP01891 HMGA1P1-201ENST00000415560 1062 ntBASIC11.8□□□□□ -0.52
HLA-AP01891 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC11.8□□□□□ -0.52
HLA-AP01891 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC11.8□□□□□ -0.52
HLA-AP01891 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC11.8□□□□□ -0.52
HLA-AP01891 KRT18P15-201ENST00000458108 1291 ntBASIC11.8□□□□□ -0.52
HLA-AP01891 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
HLA-AP01891 AL391280.1-201ENST00000506969 1062 ntBASIC11.8□□□□□ -0.52
HLA-AP01891 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC11.8□□□□□ -0.52
HLA-AP01891 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
HLA-AP01891 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
HLA-AP01891 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC11.8□□□□□ -0.52
HLA-AP01891 ADIRF-AS1-203ENST00000609111 3822 ntTSL 2 BASIC11.8□□□□□ -0.52
HLA-AP01891 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
HLA-AP01891 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC11.8□□□□□ -0.52
HLA-AP01891 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms