Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC14.04□□□□□ -0.16
KDELR3O43731 MIR4649-201ENST00000582839 64 ntBASIC14.04□□□□□ -0.16
KDELR3O43731 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC14.04□□□□□ -0.16
KDELR3O43731 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC14.04□□□□□ -0.16
KDELR3O43731 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC14.04□□□□□ -0.16
KDELR3O43731 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
KDELR3O43731 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
KDELR3O43731 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
KDELR3O43731 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
KDELR3O43731 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
KDELR3O43731 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC14.04□□□□□ -0.16
KDELR3O43731 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
KDELR3O43731 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
KDELR3O43731 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
KDELR3O43731 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
KDELR3O43731 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
KDELR3O43731 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
KDELR3O43731 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
KDELR3O43731 IL9RP3-201ENST00000442856 1674 ntBASIC14.04□□□□□ -0.16
KDELR3O43731 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
KDELR3O43731 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.04□□□□□ -0.16
KDELR3O43731 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
KDELR3O43731 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
KDELR3O43731 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
KDELR3O43731 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
KDELR3O43731 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
KDELR3O43731 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
KDELR3O43731 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
KDELR3O43731 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
KDELR3O43731 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
KDELR3O43731 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC14.03□□□□□ -0.16
KDELR3O43731 LSS-211ENST00000522411 2523 ntTSL 2 BASIC14.03□□□□□ -0.16
KDELR3O43731 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
KDELR3O43731 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
KDELR3O43731 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
KDELR3O43731 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
KDELR3O43731 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
KDELR3O43731 OR7E115P-201ENST00000382617 1024 ntBASIC14.03□□□□□ -0.16
KDELR3O43731 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC14.03□□□□□ -0.16
KDELR3O43731 ACTBP14-201ENST00000411655 1089 ntBASIC14.03□□□□□ -0.16
KDELR3O43731 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
KDELR3O43731 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC14.03□□□□□ -0.16
KDELR3O43731 BUD31-205ENST00000456893 512 ntTSL 5 BASIC14.03□□□□□ -0.16
KDELR3O43731 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC14.03□□□□□ -0.16
KDELR3O43731 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC14.03□□□□□ -0.16
KDELR3O43731 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
KDELR3O43731 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC14.03□□□□□ -0.16
KDELR3O43731 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC14.03□□□□□ -0.16
KDELR3O43731 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC14.03□□□□□ -0.16
KDELR3O43731 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC14.03□□□□□ -0.16
KDELR3O43731 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
KDELR3O43731 AC090502.4-201ENST00000551714 1386 ntBASIC14.03□□□□□ -0.16
KDELR3O43731 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
KDELR3O43731 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC14.03□□□□□ -0.16
KDELR3O43731 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC14.03□□□□□ -0.16
KDELR3O43731 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC14.03□□□□□ -0.16
KDELR3O43731 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14.03□□□□□ -0.16
KDELR3O43731 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
KDELR3O43731 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC14.03□□□□□ -0.16
KDELR3O43731 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC14.03□□□□□ -0.16
KDELR3O43731 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
KDELR3O43731 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC14.03□□□□□ -0.16
KDELR3O43731 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
KDELR3O43731 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
KDELR3O43731 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.03□□□□□ -0.16
KDELR3O43731 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
KDELR3O43731 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
KDELR3O43731 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.03□□□□□ -0.16
KDELR3O43731 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
KDELR3O43731 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
KDELR3O43731 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
KDELR3O43731 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
KDELR3O43731 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
KDELR3O43731 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
KDELR3O43731 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
KDELR3O43731 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
KDELR3O43731 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC14.02□□□□□ -0.16
KDELR3O43731 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
KDELR3O43731 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
KDELR3O43731 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
KDELR3O43731 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
KDELR3O43731 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
KDELR3O43731 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
KDELR3O43731 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
KDELR3O43731 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
KDELR3O43731 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
KDELR3O43731 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
KDELR3O43731 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
KDELR3O43731 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
KDELR3O43731 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
KDELR3O43731 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
KDELR3O43731 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC14.02□□□□□ -0.16
KDELR3O43731 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
KDELR3O43731 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC14.02□□□□□ -0.17
KDELR3O43731 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC14.02□□□□□ -0.17
KDELR3O43731 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
KDELR3O43731 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC14.02□□□□□ -0.17
KDELR3O43731 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
KDELR3O43731 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
KDELR3O43731 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms