Protein–RNA interactions for Protein: Q9Y577

TRIM17, E3 ubiquitin-protein ligase TRIM17, humanhuman

Predictions only

Length 477 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM17Q9Y577 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM17Q9Y577 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM17Q9Y577 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM17Q9Y577 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM17Q9Y577 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM17Q9Y577 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC15.53■□□□□ 0.08
TRIM17Q9Y577 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
TRIM17Q9Y577 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM17Q9Y577 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM17Q9Y577 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM17Q9Y577 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM17Q9Y577 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
TRIM17Q9Y577 ZMAT5-201ENST00000344318 899 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM17Q9Y577 KLK8-203ENST00000347619 555 ntTSL 2 BASIC15.53■□□□□ 0.08
TRIM17Q9Y577 UBIAD1-201ENST00000376804 825 ntTSL 2 BASIC15.53■□□□□ 0.08
TRIM17Q9Y577 AC000078.1-201ENST00000420617 682 ntBASIC15.53■□□□□ 0.08
TRIM17Q9Y577 RBMX2P5-201ENST00000424312 969 ntBASIC15.53■□□□□ 0.08
TRIM17Q9Y577 AP000959.1-201ENST00000441759 977 ntTSL 3 BASIC15.53■□□□□ 0.08
TRIM17Q9Y577 RN7SL677P-201ENST00000466970 319 ntBASIC15.53■□□□□ 0.08
TRIM17Q9Y577 OR2A1-AS1-203ENST00000468575 568 ntBASIC15.53■□□□□ 0.08
TRIM17Q9Y577 CDHR4-205ENST00000487256 1017 ntTSL 5 BASIC15.53■□□□□ 0.08
TRIM17Q9Y577 SPG20-AS1-203ENST00000493739 566 ntTSL 3 BASIC15.53■□□□□ 0.08
TRIM17Q9Y577 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC15.53■□□□□ 0.08
TRIM17Q9Y577 AC078923.1-201ENST00000552856 748 ntTSL 3 BASIC15.53■□□□□ 0.08
TRIM17Q9Y577 AC005920.4-201ENST00000573301 492 ntTSL 4 BASIC15.53■□□□□ 0.08
TRIM17Q9Y577 AC239600.1-201ENST00000603201 462 ntBASIC15.53■□□□□ 0.08
TRIM17Q9Y577 HIST1H3E-201ENST00000614911 462 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
TRIM17Q9Y577 FXYD4-204ENST00000616495 778 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TRIM17Q9Y577 LUC7L3-223ENST00000625349 408 ntTSL 2 BASIC15.53■□□□□ 0.08
TRIM17Q9Y577 AC245427.1-201ENST00000633705 760 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
TRIM17Q9Y577 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
TRIM17Q9Y577 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM17Q9Y577 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM17Q9Y577 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM17Q9Y577 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
TRIM17Q9Y577 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM17Q9Y577 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM17Q9Y577 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
TRIM17Q9Y577 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
TRIM17Q9Y577 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM17Q9Y577 NME1-209ENST00000511355 1645 ntTSL 5 BASIC15.53■□□□□ 0.08
TRIM17Q9Y577 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM17Q9Y577 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM17Q9Y577 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM17Q9Y577 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM17Q9Y577 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
TRIM17Q9Y577 AC011498.7-201ENST00000624986 2027 ntBASIC15.53■□□□□ 0.08
TRIM17Q9Y577 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
TRIM17Q9Y577 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
TRIM17Q9Y577 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
TRIM17Q9Y577 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM17Q9Y577 EFHB-202ENST00000344838 2389 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
TRIM17Q9Y577 NORAD-201ENST00000565493 5339 ntBASIC15.53■□□□□ 0.08
TRIM17Q9Y577 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM17Q9Y577 STK16-202ENST00000409260 1493 ntTSL 5 BASIC15.52■□□□□ 0.08
TRIM17Q9Y577 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
TRIM17Q9Y577 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM17Q9Y577 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM17Q9Y577 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM17Q9Y577 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.52■□□□□ 0.08
TRIM17Q9Y577 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM17Q9Y577 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM17Q9Y577 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM17Q9Y577 AC106872.9-201ENST00000512437 1393 ntBASIC15.52■□□□□ 0.08
TRIM17Q9Y577 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM17Q9Y577 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM17Q9Y577 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.52■□□□□ 0.08
TRIM17Q9Y577 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
TRIM17Q9Y577 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM17Q9Y577 CAV2-202ENST00000343213 776 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM17Q9Y577 SFTPA2-202ENST00000372327 815 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM17Q9Y577 MB-204ENST00000401702 1043 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM17Q9Y577 RN7SL638P-201ENST00000494527 290 ntBASIC15.52■□□□□ 0.08
TRIM17Q9Y577 MYCBP-203ENST00000494695 750 ntTSL 2 BASIC15.52■□□□□ 0.08
TRIM17Q9Y577 CLNK-203ENST00000507719 1143 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM17Q9Y577 KIAA1191-210ENST00000510164 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM17Q9Y577 RPL10P8-201ENST00000522888 313 ntBASIC15.52■□□□□ 0.08
TRIM17Q9Y577 AC068858.1-201ENST00000525114 1239 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM17Q9Y577 AC004923.1-201ENST00000527543 776 ntTSL 5 BASIC15.52■□□□□ 0.08
TRIM17Q9Y577 METTL7AP1-201ENST00000547343 496 ntBASIC15.52■□□□□ 0.08
TRIM17Q9Y577 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC15.52■□□□□ 0.08
TRIM17Q9Y577 AL139317.2-201ENST00000556998 158 ntBASIC15.52■□□□□ 0.08
TRIM17Q9Y577 LINC00514-203ENST00000573465 313 ntTSL 5 BASIC15.52■□□□□ 0.08
TRIM17Q9Y577 RN7SL134P-201ENST00000579756 303 ntBASIC15.52■□□□□ 0.08
TRIM17Q9Y577 PDZRN3-AS1-203ENST00000608743 780 ntTSL 5 BASIC15.52■□□□□ 0.08
TRIM17Q9Y577 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
TRIM17Q9Y577 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
TRIM17Q9Y577 AC023509.3-202ENST00000591834 1609 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
TRIM17Q9Y577 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM17Q9Y577 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
TRIM17Q9Y577 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM17Q9Y577 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC15.52■□□□□ 0.07
TRIM17Q9Y577 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM17Q9Y577 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM17Q9Y577 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM17Q9Y577 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM17Q9Y577 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.52■□□□□ 0.07
TRIM17Q9Y577 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
TRIM17Q9Y577 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.52■□□□□ 0.07
TRIM17Q9Y577 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms