Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
UPF2Q9HAU5 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
UPF2Q9HAU5 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC17.17■□□□□ 0.34
UPF2Q9HAU5 MAX-218ENST00000557746 571 ntTSL 4 BASIC17.17■□□□□ 0.34
UPF2Q9HAU5 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
UPF2Q9HAU5 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
UPF2Q9HAU5 CACNB1-202ENST00000394303 3742 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
UPF2Q9HAU5 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
UPF2Q9HAU5 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
UPF2Q9HAU5 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
UPF2Q9HAU5 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
UPF2Q9HAU5 AC107375.1-201ENST00000564464 2231 ntBASIC17.17■□□□□ 0.34
UPF2Q9HAU5 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
UPF2Q9HAU5 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
UPF2Q9HAU5 LINC00115-201ENST00000473798 1317 ntBASIC17.17■□□□□ 0.34
UPF2Q9HAU5 DPYSL5-201ENST00000288699 5209 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
UPF2Q9HAU5 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC17.17■□□□□ 0.34
UPF2Q9HAU5 BCL2L11-217ENST00000610735 5120 ntTSL 5 BASIC17.17■□□□□ 0.34
UPF2Q9HAU5 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
UPF2Q9HAU5 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
UPF2Q9HAU5 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
UPF2Q9HAU5 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
UPF2Q9HAU5 CCDC187-204ENST00000624277 3918 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
UPF2Q9HAU5 MTMR3-201ENST00000323630 5866 ntTSL 5 BASIC17.16■□□□□ 0.34
UPF2Q9HAU5 KCNT1-213ENST00000630792 3606 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
UPF2Q9HAU5 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UPF2Q9HAU5 TRPC6-201ENST00000344327 4612 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UPF2Q9HAU5 GPR176-201ENST00000299092 3844 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
UPF2Q9HAU5 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
UPF2Q9HAU5 TUBGCP2-210ENST00000543663 4302 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
UPF2Q9HAU5 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
UPF2Q9HAU5 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
UPF2Q9HAU5 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
UPF2Q9HAU5 DNMT3B-203ENST00000348286 4048 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
UPF2Q9HAU5 AC027369.3-201ENST00000530465 3707 ntBASIC17.16■□□□□ 0.34
UPF2Q9HAU5 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
UPF2Q9HAU5 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
UPF2Q9HAU5 TCF3-202ENST00000344749 4289 ntTSL 5 BASIC17.16■□□□□ 0.34
UPF2Q9HAU5 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC17.16■□□□□ 0.34
UPF2Q9HAU5 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UPF2Q9HAU5 AC016694.1-201ENST00000434179 700 ntBASIC17.16■□□□□ 0.34
UPF2Q9HAU5 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC17.16■□□□□ 0.34
UPF2Q9HAU5 AC078819.1-201ENST00000547454 765 ntBASIC17.16■□□□□ 0.34
UPF2Q9HAU5 AC012085.1-201ENST00000548270 765 ntBASIC17.16■□□□□ 0.34
UPF2Q9HAU5 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
UPF2Q9HAU5 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC17.16■□□□□ 0.34
UPF2Q9HAU5 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.16■□□□□ 0.34
UPF2Q9HAU5 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC17.16■□□□□ 0.34
UPF2Q9HAU5 LINC02560-201ENST00000596379 459 ntBASIC17.16■□□□□ 0.34
UPF2Q9HAU5 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
UPF2Q9HAU5 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
UPF2Q9HAU5 GOLGA6L4-202ENST00000422563 4155 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
UPF2Q9HAU5 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
UPF2Q9HAU5 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UPF2Q9HAU5 VENTXP1-201ENST00000569334 2716 ntBASIC17.16■□□□□ 0.34
UPF2Q9HAU5 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC17.16■□□□□ 0.34
UPF2Q9HAU5 PLEKHM1P1-202ENST00000578036 4318 ntTSL 2 BASIC17.16■□□□□ 0.34
UPF2Q9HAU5 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
UPF2Q9HAU5 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
UPF2Q9HAU5 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
UPF2Q9HAU5 AC022364.1-202ENST00000617468 2409 ntBASIC17.16■□□□□ 0.34
UPF2Q9HAU5 MANEA-AS1-201ENST00000564541 2268 ntBASIC17.16■□□□□ 0.34
UPF2Q9HAU5 CDH11-201ENST00000268603 6857 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UPF2Q9HAU5 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UPF2Q9HAU5 USP31-203ENST00000567975 2142 ntTSL 2 BASIC17.15■□□□□ 0.34
UPF2Q9HAU5 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC17.15■□□□□ 0.34
UPF2Q9HAU5 CAMTA2-204ENST00000414043 4589 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
UPF2Q9HAU5 SYNM-203ENST00000560674 5908 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
UPF2Q9HAU5 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC17.15■□□□□ 0.34
UPF2Q9HAU5 GOLGA2P5-201ENST00000266746 2395 ntBASIC17.15■□□□□ 0.34
UPF2Q9HAU5 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
UPF2Q9HAU5 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UPF2Q9HAU5 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
UPF2Q9HAU5 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
UPF2Q9HAU5 CHD4-211ENST00000544484 6554 ntTSL 2 BASIC17.15■□□□□ 0.34
UPF2Q9HAU5 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC17.15■□□□□ 0.34
UPF2Q9HAU5 FOXN4-202ENST00000355216 2958 ntTSL 2 BASIC17.15■□□□□ 0.34
UPF2Q9HAU5 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UPF2Q9HAU5 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UPF2Q9HAU5 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UPF2Q9HAU5 GMEB2-201ENST00000266068 4559 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
UPF2Q9HAU5 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UPF2Q9HAU5 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UPF2Q9HAU5 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
UPF2Q9HAU5 AC092933.1-201ENST00000393644 945 ntBASIC17.15■□□□□ 0.34
UPF2Q9HAU5 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
UPF2Q9HAU5 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
UPF2Q9HAU5 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC17.15■□□□□ 0.34
UPF2Q9HAU5 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
UPF2Q9HAU5 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC17.15■□□□□ 0.34
UPF2Q9HAU5 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
UPF2Q9HAU5 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
UPF2Q9HAU5 TP53TG3HP-202ENST00000569755 579 ntBASIC17.15■□□□□ 0.34
UPF2Q9HAU5 NAA38-206ENST00000576384 424 ntTSL 2 BASIC17.15■□□□□ 0.34
UPF2Q9HAU5 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC17.15■□□□□ 0.34
UPF2Q9HAU5 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC17.15■□□□□ 0.34
UPF2Q9HAU5 ZBTB7B-203ENST00000417934 4017 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
UPF2Q9HAU5 AC244394.1-201ENST00000435000 1665 ntBASIC17.15■□□□□ 0.34
UPF2Q9HAU5 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
UPF2Q9HAU5 AHI1-205ENST00000457866 5549 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms