Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 LINC00265-2P-201ENST00000413372 782 ntBASIC12.7□□□□□ -0.38
RSPO3Q9BXY4 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC12.7□□□□□ -0.38
RSPO3Q9BXY4 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC12.7□□□□□ -0.38
RSPO3Q9BXY4 AL353637.1-201ENST00000451571 732 ntBASIC12.7□□□□□ -0.38
RSPO3Q9BXY4 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC12.7□□□□□ -0.38
RSPO3Q9BXY4 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
RSPO3Q9BXY4 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC12.7□□□□□ -0.38
RSPO3Q9BXY4 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC12.7□□□□□ -0.38
RSPO3Q9BXY4 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RSPO3Q9BXY4 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC12.7□□□□□ -0.38
RSPO3Q9BXY4 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RSPO3Q9BXY4 AF254983.2-201ENST00000612331 135 ntBASIC12.7□□□□□ -0.38
RSPO3Q9BXY4 HPX-213ENST00000615166 826 ntTSL 5 BASIC12.7□□□□□ -0.38
RSPO3Q9BXY4 AC138649.2-201ENST00000615886 705 ntBASIC12.7□□□□□ -0.38
RSPO3Q9BXY4 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC12.7□□□□□ -0.38
RSPO3Q9BXY4 CDK7-214ENST00000626796 358 ntTSL 5 BASIC12.7□□□□□ -0.38
RSPO3Q9BXY4 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC12.7□□□□□ -0.38
RSPO3Q9BXY4 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC12.7□□□□□ -0.38
RSPO3Q9BXY4 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
RSPO3Q9BXY4 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC12.7□□□□□ -0.38
RSPO3Q9BXY4 IL19-201ENST00000270218 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RSPO3Q9BXY4 ZNF571-AS1-203ENST00000586139 2684 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RSPO3Q9BXY4 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
RSPO3Q9BXY4 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
RSPO3Q9BXY4 TNFSF8-201ENST00000223795 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RSPO3Q9BXY4 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RSPO3Q9BXY4 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
RSPO3Q9BXY4 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RSPO3Q9BXY4 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
RSPO3Q9BXY4 TRPV1-201ENST00000310522 2340 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RSPO3Q9BXY4 ZFYVE19-209ENST00000564258 2059 ntTSL 2 BASIC12.69□□□□□ -0.38
RSPO3Q9BXY4 AC138150.2-201ENST00000589796 2053 ntTSL 2 BASIC12.69□□□□□ -0.38
RSPO3Q9BXY4 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RSPO3Q9BXY4 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RSPO3Q9BXY4 LAS1L-201ENST00000374804 2261 ntTSL 2 BASIC12.69□□□□□ -0.38
RSPO3Q9BXY4 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
RSPO3Q9BXY4 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RSPO3Q9BXY4 ZNF595-205ENST00000610261 2911 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
RSPO3Q9BXY4 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
RSPO3Q9BXY4 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
RSPO3Q9BXY4 ZNF124-202ENST00000472531 2243 ntTSL 2 BASIC12.69□□□□□ -0.38
RSPO3Q9BXY4 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RSPO3Q9BXY4 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
RSPO3Q9BXY4 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC12.69□□□□□ -0.38
RSPO3Q9BXY4 VPS33B-202ENST00000535906 2420 ntTSL 2 BASIC12.69□□□□□ -0.38
RSPO3Q9BXY4 INHBC-201ENST00000309668 1992 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RSPO3Q9BXY4 AL357060.2-202ENST00000606998 1959 ntTSL 2 BASIC12.69□□□□□ -0.38
RSPO3Q9BXY4 H1FX-AS1-201ENST00000383461 2600 ntTSL 2 BASIC12.69□□□□□ -0.38
RSPO3Q9BXY4 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
RSPO3Q9BXY4 HNRNPLP1-201ENST00000421896 1501 ntBASIC12.69□□□□□ -0.38
RSPO3Q9BXY4 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
RSPO3Q9BXY4 PARP10-203ENST00000524918 3469 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
RSPO3Q9BXY4 VPS54-203ENST00000409558 4337 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RSPO3Q9BXY4 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC12.69□□□□□ -0.38
RSPO3Q9BXY4 CSNK1G1-209ENST00000634811 2592 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
RSPO3Q9BXY4 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
RSPO3Q9BXY4 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC12.69□□□□□ -0.38
RSPO3Q9BXY4 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RSPO3Q9BXY4 APOC3-202ENST00000375345 604 ntTSL 5 BASIC12.69□□□□□ -0.38
RSPO3Q9BXY4 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RSPO3Q9BXY4 BRWD1P1-201ENST00000401091 371 ntBASIC12.69□□□□□ -0.38
RSPO3Q9BXY4 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RSPO3Q9BXY4 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC12.69□□□□□ -0.38
RSPO3Q9BXY4 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RSPO3Q9BXY4 SPTLC1P5-201ENST00000450718 252 ntBASIC12.69□□□□□ -0.38
RSPO3Q9BXY4 BX284668.4-201ENST00000453917 508 ntBASIC12.69□□□□□ -0.38
RSPO3Q9BXY4 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RSPO3Q9BXY4 HIST2H2BC-201ENST00000498492 580 ntBASIC12.69□□□□□ -0.38
RSPO3Q9BXY4 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RSPO3Q9BXY4 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
RSPO3Q9BXY4 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
RSPO3Q9BXY4 EMC4-209ENST00000559421 497 ntTSL 2 BASIC12.69□□□□□ -0.38
RSPO3Q9BXY4 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC12.69□□□□□ -0.38
RSPO3Q9BXY4 AC026803.1-201ENST00000569130 274 ntBASIC12.69□□□□□ -0.38
RSPO3Q9BXY4 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC12.69□□□□□ -0.38
RSPO3Q9BXY4 NAT9-211ENST00000580632 799 ntTSL 3 BASIC12.69□□□□□ -0.38
RSPO3Q9BXY4 AL022328.3-201ENST00000607943 679 ntBASIC12.69□□□□□ -0.38
RSPO3Q9BXY4 AC009145.4-201ENST00000625119 1294 ntBASIC12.69□□□□□ -0.38
RSPO3Q9BXY4 CMC2-224ENST00000630396 481 ntTSL 5 BASIC12.69□□□□□ -0.38
RSPO3Q9BXY4 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC12.69□□□□□ -0.38
RSPO3Q9BXY4 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RSPO3Q9BXY4 GPR55-205ENST00000622008 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RSPO3Q9BXY4 GABRR2-201ENST00000402938 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RSPO3Q9BXY4 SMG6-203ENST00000536871 1865 ntTSL 2 BASIC12.69□□□□□ -0.38
RSPO3Q9BXY4 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RSPO3Q9BXY4 MEIS2-215ENST00000559561 1442 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
RSPO3Q9BXY4 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
RSPO3Q9BXY4 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
RSPO3Q9BXY4 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
RSPO3Q9BXY4 CCDC149-208ENST00000635206 2362 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
RSPO3Q9BXY4 TARS2-205ENST00000438568 2188 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RSPO3Q9BXY4 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC12.69□□□□□ -0.38
RSPO3Q9BXY4 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
RSPO3Q9BXY4 TMEM182-202ENST00000409528 3112 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RSPO3Q9BXY4 KLHL24-211ENST00000476808 2126 ntTSL 2 BASIC12.68□□□□□ -0.38
RSPO3Q9BXY4 CLASP2-218ENST00000487200 1940 ntTSL 2 BASIC12.68□□□□□ -0.38
RSPO3Q9BXY4 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RSPO3Q9BXY4 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RSPO3Q9BXY4 PDXDC2P-206ENST00000534700 1315 ntBASIC12.68□□□□□ -0.38
RSPO3Q9BXY4 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms