Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC16.18■□□□□ 0.18
SLF1Q9BQI6 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
SLF1Q9BQI6 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
SLF1Q9BQI6 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
SLF1Q9BQI6 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SLF1Q9BQI6 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC16.18■□□□□ 0.18
SLF1Q9BQI6 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SLF1Q9BQI6 RN7SL396P-201ENST00000471086 295 ntBASIC16.18■□□□□ 0.18
SLF1Q9BQI6 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC16.18■□□□□ 0.18
SLF1Q9BQI6 OR2A1-AS1-210ENST00000496968 531 ntBASIC16.18■□□□□ 0.18
SLF1Q9BQI6 REEP5-205ENST00000504247 480 ntTSL 5 BASIC16.18■□□□□ 0.18
SLF1Q9BQI6 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC16.18■□□□□ 0.18
SLF1Q9BQI6 COQ10BP2-201ENST00000513804 724 ntBASIC16.18■□□□□ 0.18
SLF1Q9BQI6 AC100858.1-201ENST00000514059 1228 ntBASIC16.18■□□□□ 0.18
SLF1Q9BQI6 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SLF1Q9BQI6 BATF-202ENST00000555504 361 ntTSL 2 BASIC16.18■□□□□ 0.18
SLF1Q9BQI6 C2orf69P1-201ENST00000563532 1093 ntBASIC16.18■□□□□ 0.18
SLF1Q9BQI6 AL049840.2-201ENST00000602722 535 ntBASIC16.18■□□□□ 0.18
SLF1Q9BQI6 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SLF1Q9BQI6 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC16.18■□□□□ 0.18
SLF1Q9BQI6 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLF1Q9BQI6 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLF1Q9BQI6 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLF1Q9BQI6 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SLF1Q9BQI6 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLF1Q9BQI6 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SLF1Q9BQI6 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SLF1Q9BQI6 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SLF1Q9BQI6 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SLF1Q9BQI6 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SLF1Q9BQI6 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLF1Q9BQI6 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLF1Q9BQI6 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLF1Q9BQI6 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
SLF1Q9BQI6 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SLF1Q9BQI6 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
SLF1Q9BQI6 AC015909.5-201ENST00000624336 2266 ntBASIC16.17■□□□□ 0.18
SLF1Q9BQI6 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLF1Q9BQI6 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC16.17■□□□□ 0.18
SLF1Q9BQI6 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLF1Q9BQI6 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLF1Q9BQI6 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC16.17■□□□□ 0.18
SLF1Q9BQI6 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC16.17■□□□□ 0.18
SLF1Q9BQI6 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLF1Q9BQI6 USP39-207ENST00000450066 2086 ntTSL 2 BASIC16.17■□□□□ 0.18
SLF1Q9BQI6 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC16.17■□□□□ 0.18
SLF1Q9BQI6 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC16.17■□□□□ 0.18
SLF1Q9BQI6 FUCA1P1-201ENST00000374476 1351 ntBASIC16.17■□□□□ 0.18
SLF1Q9BQI6 C8orf49-201ENST00000525043 1968 ntBASIC16.17■□□□□ 0.18
SLF1Q9BQI6 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SLF1Q9BQI6 AC126335.2-201ENST00000623362 4637 ntBASIC16.17■□□□□ 0.18
SLF1Q9BQI6 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
SLF1Q9BQI6 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLF1Q9BQI6 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLF1Q9BQI6 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLF1Q9BQI6 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLF1Q9BQI6 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLF1Q9BQI6 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
SLF1Q9BQI6 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SLF1Q9BQI6 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC16.17■□□□□ 0.18
SLF1Q9BQI6 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SLF1Q9BQI6 KRT18P62-201ENST00000446618 1287 ntBASIC16.17■□□□□ 0.18
SLF1Q9BQI6 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC16.17■□□□□ 0.18
SLF1Q9BQI6 AC093300.1-201ENST00000510368 1201 ntBASIC16.17■□□□□ 0.18
SLF1Q9BQI6 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC16.17■□□□□ 0.18
SLF1Q9BQI6 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLF1Q9BQI6 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC16.17■□□□□ 0.18
SLF1Q9BQI6 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC16.17■□□□□ 0.18
SLF1Q9BQI6 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC16.17■□□□□ 0.18
SLF1Q9BQI6 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC16.17■□□□□ 0.18
SLF1Q9BQI6 AC012073.1-201ENST00000606114 1108 ntBASIC16.17■□□□□ 0.18
SLF1Q9BQI6 AC010976.2-201ENST00000609697 852 ntBASIC16.17■□□□□ 0.18
SLF1Q9BQI6 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLF1Q9BQI6 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLF1Q9BQI6 AC105206.1-202ENST00000314927 2368 ntBASIC16.17■□□□□ 0.18
SLF1Q9BQI6 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SLF1Q9BQI6 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC16.17■□□□□ 0.18
SLF1Q9BQI6 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SLF1Q9BQI6 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLF1Q9BQI6 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLF1Q9BQI6 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC16.17■□□□□ 0.18
SLF1Q9BQI6 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLF1Q9BQI6 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SLF1Q9BQI6 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SLF1Q9BQI6 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SLF1Q9BQI6 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLF1Q9BQI6 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC16.16■□□□□ 0.18
SLF1Q9BQI6 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLF1Q9BQI6 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLF1Q9BQI6 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SLF1Q9BQI6 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLF1Q9BQI6 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC16.16■□□□□ 0.18
SLF1Q9BQI6 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLF1Q9BQI6 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC16.16■□□□□ 0.18
SLF1Q9BQI6 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
SLF1Q9BQI6 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLF1Q9BQI6 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC16.16■□□□□ 0.18
SLF1Q9BQI6 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC16.16■□□□□ 0.18
SLF1Q9BQI6 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLF1Q9BQI6 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms