Protein–RNA interactions for Protein: Q99985

SEMA3C, Semaphorin-3C, humanhuman

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3CQ99985 SNORA50.1-201ENST00000628590 135 ntBASIC14.15□□□□□ -0.14
SEMA3CQ99985 CMC2-224ENST00000630396 481 ntTSL 5 BASIC14.15□□□□□ -0.14
SEMA3CQ99985 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC14.15□□□□□ -0.14
SEMA3CQ99985 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SEMA3CQ99985 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SEMA3CQ99985 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SEMA3CQ99985 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SEMA3CQ99985 PTENP1-202ENST00000532280 3996 ntBASIC14.15□□□□□ -0.14
SEMA3CQ99985 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SEMA3CQ99985 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
SEMA3CQ99985 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SEMA3CQ99985 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.15□□□□□ -0.14
SEMA3CQ99985 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC14.15□□□□□ -0.14
SEMA3CQ99985 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SEMA3CQ99985 DDC-204ENST00000426377 1700 ntTSL 3 BASIC14.15□□□□□ -0.14
SEMA3CQ99985 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC14.15□□□□□ -0.14
SEMA3CQ99985 ABCD1P2-201ENST00000429313 1601 ntBASIC14.15□□□□□ -0.14
SEMA3CQ99985 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC14.15□□□□□ -0.14
SEMA3CQ99985 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
SEMA3CQ99985 CR383656.2-201ENST00000548656 2254 ntBASIC14.15□□□□□ -0.14
SEMA3CQ99985 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SEMA3CQ99985 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SEMA3CQ99985 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
SEMA3CQ99985 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
SEMA3CQ99985 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
SEMA3CQ99985 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SEMA3CQ99985 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SEMA3CQ99985 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SEMA3CQ99985 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC14.14□□□□□ -0.15
SEMA3CQ99985 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SEMA3CQ99985 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SEMA3CQ99985 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SEMA3CQ99985 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC14.14□□□□□ -0.15
SEMA3CQ99985 AC020763.3-201ENST00000625095 2904 ntBASIC14.14□□□□□ -0.15
SEMA3CQ99985 AC105206.1-202ENST00000314927 2368 ntBASIC14.14□□□□□ -0.15
SEMA3CQ99985 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SEMA3CQ99985 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC14.14□□□□□ -0.15
SEMA3CQ99985 SCARNA12-201ENST00000459155 270 ntBASIC14.14□□□□□ -0.15
SEMA3CQ99985 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SEMA3CQ99985 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC14.14□□□□□ -0.15
SEMA3CQ99985 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC14.14□□□□□ -0.15
SEMA3CQ99985 MIR4265-201ENST00000582152 99 ntBASIC14.14□□□□□ -0.15
SEMA3CQ99985 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC14.14□□□□□ -0.15
SEMA3CQ99985 AC018635.2-201ENST00000608625 364 ntBASIC14.14□□□□□ -0.15
SEMA3CQ99985 HPX-213ENST00000615166 826 ntTSL 5 BASIC14.14□□□□□ -0.15
SEMA3CQ99985 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC14.14□□□□□ -0.15
SEMA3CQ99985 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SEMA3CQ99985 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC14.14□□□□□ -0.15
SEMA3CQ99985 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SEMA3CQ99985 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SEMA3CQ99985 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SEMA3CQ99985 LINC00638-201ENST00000555578 2518 ntBASIC14.14□□□□□ -0.15
SEMA3CQ99985 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SEMA3CQ99985 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SEMA3CQ99985 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SEMA3CQ99985 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SEMA3CQ99985 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC14.14□□□□□ -0.15
SEMA3CQ99985 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
SEMA3CQ99985 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SEMA3CQ99985 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SEMA3CQ99985 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SEMA3CQ99985 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SEMA3CQ99985 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
SEMA3CQ99985 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
SEMA3CQ99985 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC14.14□□□□□ -0.15
SEMA3CQ99985 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC14.14□□□□□ -0.15
SEMA3CQ99985 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SEMA3CQ99985 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
SEMA3CQ99985 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC14.14□□□□□ -0.15
SEMA3CQ99985 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SEMA3CQ99985 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SEMA3CQ99985 AC006480.2-201ENST00000609770 1337 ntBASIC14.14□□□□□ -0.15
SEMA3CQ99985 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
SEMA3CQ99985 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SEMA3CQ99985 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SEMA3CQ99985 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SEMA3CQ99985 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
SEMA3CQ99985 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SEMA3CQ99985 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
SEMA3CQ99985 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.13□□□□□ -0.15
SEMA3CQ99985 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
SEMA3CQ99985 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC14.13□□□□□ -0.15
SEMA3CQ99985 AC020917.4-201ENST00000623994 1999 ntBASIC14.13□□□□□ -0.15
SEMA3CQ99985 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SEMA3CQ99985 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC14.13□□□□□ -0.15
SEMA3CQ99985 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
SEMA3CQ99985 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SEMA3CQ99985 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC14.13□□□□□ -0.15
SEMA3CQ99985 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SEMA3CQ99985 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SEMA3CQ99985 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SEMA3CQ99985 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
SEMA3CQ99985 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SEMA3CQ99985 AL391647.1-201ENST00000395664 511 ntBASIC14.13□□□□□ -0.15
SEMA3CQ99985 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SEMA3CQ99985 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC14.13□□□□□ -0.15
SEMA3CQ99985 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC14.13□□□□□ -0.15
SEMA3CQ99985 AC005722.1-201ENST00000431878 964 ntBASIC14.13□□□□□ -0.15
SEMA3CQ99985 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
SEMA3CQ99985 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms