Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
RAB40CQ96S21 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC11.36□□□□□ -0.59
RAB40CQ96S21 AL139158.3-201ENST00000641212 1562 ntBASIC11.36□□□□□ -0.59
RAB40CQ96S21 DYSF-208ENST00000410020 6657 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
RAB40CQ96S21 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
RAB40CQ96S21 CILP-201ENST00000261883 5695 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
RAB40CQ96S21 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
RAB40CQ96S21 PPP4R3B-206ENST00000616407 4385 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
RAB40CQ96S21 AC008040.5-201ENST00000599781 1781 ntBASIC11.36□□□□□ -0.59
RAB40CQ96S21 CACNA1G-218ENST00000507510 7014 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
RAB40CQ96S21 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC11.36□□□□□ -0.59
RAB40CQ96S21 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
RAB40CQ96S21 FBN3-201ENST00000270509 9232 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
RAB40CQ96S21 TCF3-220ENST00000611869 4409 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
RAB40CQ96S21 KRT15-202ENST00000393974 3758 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
RAB40CQ96S21 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
RAB40CQ96S21 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
RAB40CQ96S21 DGKZ-204ENST00000454345 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
RAB40CQ96S21 MANEA-AS1-201ENST00000564541 2268 ntBASIC11.35□□□□□ -0.59
RAB40CQ96S21 DNAH10OS-201ENST00000514254 5040 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
RAB40CQ96S21 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC11.35□□□□□ -0.59
RAB40CQ96S21 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
RAB40CQ96S21 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
RAB40CQ96S21 BCL2L13-214ENST00000543133 4975 ntTSL 2 BASIC11.35□□□□□ -0.59
RAB40CQ96S21 BCL2L13-217ENST00000618481 4961 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
RAB40CQ96S21 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
RAB40CQ96S21 PRDM16-208ENST00000514189 4236 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
RAB40CQ96S21 BISPR-204ENST00000634675 1806 ntTSL 2 BASIC11.35□□□□□ -0.59
RAB40CQ96S21 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC11.35□□□□□ -0.59
RAB40CQ96S21 HNRNPH1-216ENST00000510411 2105 ntTSL 5 BASIC11.35□□□□□ -0.59
RAB40CQ96S21 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
RAB40CQ96S21 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
RAB40CQ96S21 PCDHA4-202ENST00000512229 4163 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
RAB40CQ96S21 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
RAB40CQ96S21 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC11.35□□□□□ -0.59
RAB40CQ96S21 MESD-201ENST00000261758 4264 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
RAB40CQ96S21 ZNF106-205ENST00000565611 5081 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
RAB40CQ96S21 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
RAB40CQ96S21 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
RAB40CQ96S21 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
RAB40CQ96S21 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
RAB40CQ96S21 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
RAB40CQ96S21 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC11.35□□□□□ -0.59
RAB40CQ96S21 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC11.35□□□□□ -0.59
RAB40CQ96S21 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC11.35□□□□□ -0.59
RAB40CQ96S21 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
RAB40CQ96S21 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC11.35□□□□□ -0.59
RAB40CQ96S21 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC11.35□□□□□ -0.59
RAB40CQ96S21 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC11.35□□□□□ -0.59
RAB40CQ96S21 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC11.35□□□□□ -0.59
RAB40CQ96S21 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
RAB40CQ96S21 PAM16-204ENST00000571941 674 ntTSL 3 BASIC11.35□□□□□ -0.59
RAB40CQ96S21 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
RAB40CQ96S21 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC11.35□□□□□ -0.59
RAB40CQ96S21 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
RAB40CQ96S21 WFDC1-204ENST00000613603 549 ntBASIC11.35□□□□□ -0.59
RAB40CQ96S21 AL033527.5-201ENST00000641382 801 ntBASIC11.35□□□□□ -0.59
RAB40CQ96S21 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC11.35□□□□□ -0.59
RAB40CQ96S21 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
RAB40CQ96S21 FRMD6-203ENST00000395718 4828 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
RAB40CQ96S21 RAPGEF6-207ENST00000507093 5742 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
RAB40CQ96S21 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
RAB40CQ96S21 AOC4P-203ENST00000566825 2289 ntBASIC11.35□□□□□ -0.59
RAB40CQ96S21 AC015819.3-201ENST00000624305 2674 ntBASIC11.35□□□□□ -0.59
RAB40CQ96S21 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
RAB40CQ96S21 AC019205.2-203ENST00000421315 3362 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
RAB40CQ96S21 SLC5A8-201ENST00000536262 4178 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
RAB40CQ96S21 KIAA1614-202ENST00000367588 9654 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
RAB40CQ96S21 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC11.35□□□□□ -0.59
RAB40CQ96S21 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
RAB40CQ96S21 DNMT1-201ENST00000340748 5408 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
RAB40CQ96S21 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC11.35□□□□□ -0.59
RAB40CQ96S21 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
RAB40CQ96S21 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
RAB40CQ96S21 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
RAB40CQ96S21 TRPC7-202ENST00000378459 2406 ntTSL 5 BASIC11.35□□□□□ -0.59
RAB40CQ96S21 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
RAB40CQ96S21 ARID4A-202ENST00000355431 5891 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
RAB40CQ96S21 CLASP2-218ENST00000487200 1940 ntTSL 2 BASIC11.35□□□□□ -0.59
RAB40CQ96S21 CACNA2D2-202ENST00000360963 5272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
RAB40CQ96S21 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
RAB40CQ96S21 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
RAB40CQ96S21 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
RAB40CQ96S21 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
RAB40CQ96S21 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
RAB40CQ96S21 LDLRAD4-201ENST00000359446 8486 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RAB40CQ96S21 AC022400.8-201ENST00000623453 3599 ntBASIC11.34□□□□□ -0.59
RAB40CQ96S21 SETD1B-204ENST00000619791 5901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
RAB40CQ96S21 AC110048.1-201ENST00000604293 2157 ntBASIC11.34□□□□□ -0.59
RAB40CQ96S21 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
RAB40CQ96S21 DPP8-201ENST00000300141 3139 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RAB40CQ96S21 CNKSR2-207ENST00000543067 4355 ntTSL 2 BASIC11.34□□□□□ -0.59
RAB40CQ96S21 ARHGEF9-220ENST00000635729 1761 ntTSL 5 BASIC11.34□□□□□ -0.59
RAB40CQ96S21 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
RAB40CQ96S21 AL355336.1-201ENST00000451355 1676 ntTSL 2 BASIC11.34□□□□□ -0.59
RAB40CQ96S21 DNAJC3-202ENST00000602402 5591 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RAB40CQ96S21 GAPDHS-201ENST00000222286 1489 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RAB40CQ96S21 RPL13AP3-202ENST00000494676 1473 ntBASIC11.34□□□□□ -0.59
RAB40CQ96S21 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
RAB40CQ96S21 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms