Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
PDLIM5Q96HC4 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PDLIM5Q96HC4 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.57□□□□□ -0.24
PDLIM5Q96HC4 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC13.57□□□□□ -0.24
PDLIM5Q96HC4 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC13.57□□□□□ -0.24
PDLIM5Q96HC4 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC13.57□□□□□ -0.24
PDLIM5Q96HC4 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
PDLIM5Q96HC4 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC13.56□□□□□ -0.24
PDLIM5Q96HC4 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PDLIM5Q96HC4 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
PDLIM5Q96HC4 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
PDLIM5Q96HC4 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC13.56□□□□□ -0.24
PDLIM5Q96HC4 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
PDLIM5Q96HC4 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PDLIM5Q96HC4 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
PDLIM5Q96HC4 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
PDLIM5Q96HC4 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PDLIM5Q96HC4 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PDLIM5Q96HC4 PPP2R2C-204ENST00000506140 1780 ntTSL 2 BASIC13.56□□□□□ -0.24
PDLIM5Q96HC4 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PDLIM5Q96HC4 Z98257.2-202ENST00000641138 1548 ntBASIC13.56□□□□□ -0.24
PDLIM5Q96HC4 ZNF277-201ENST00000361822 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PDLIM5Q96HC4 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
PDLIM5Q96HC4 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
PDLIM5Q96HC4 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
PDLIM5Q96HC4 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
PDLIM5Q96HC4 CALR4P-201ENST00000431943 946 ntBASIC13.56□□□□□ -0.24
PDLIM5Q96HC4 MSRA-203ENST00000441698 788 ntTSL 2 BASIC13.56□□□□□ -0.24
PDLIM5Q96HC4 Z97180.1-201ENST00000445173 988 ntBASIC13.56□□□□□ -0.24
PDLIM5Q96HC4 RN7SL11P-201ENST00000471305 293 ntBASIC13.56□□□□□ -0.24
PDLIM5Q96HC4 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC13.56□□□□□ -0.24
PDLIM5Q96HC4 AC095040.1-201ENST00000513286 675 ntBASIC13.56□□□□□ -0.24
PDLIM5Q96HC4 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
PDLIM5Q96HC4 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
PDLIM5Q96HC4 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC13.56□□□□□ -0.24
PDLIM5Q96HC4 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC13.56□□□□□ -0.24
PDLIM5Q96HC4 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC13.56□□□□□ -0.24
PDLIM5Q96HC4 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC13.56□□□□□ -0.24
PDLIM5Q96HC4 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC13.56□□□□□ -0.24
PDLIM5Q96HC4 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC13.56□□□□□ -0.24
PDLIM5Q96HC4 AC242376.1-201ENST00000559033 726 ntBASIC13.56□□□□□ -0.24
PDLIM5Q96HC4 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC13.56□□□□□ -0.24
PDLIM5Q96HC4 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC13.56□□□□□ -0.24
PDLIM5Q96HC4 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC13.56□□□□□ -0.24
PDLIM5Q96HC4 USP31-203ENST00000567975 2142 ntTSL 2 BASIC13.56□□□□□ -0.24
PDLIM5Q96HC4 MIR497HG-202ENST00000572453 3838 ntBASIC13.56□□□□□ -0.24
PDLIM5Q96HC4 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
PDLIM5Q96HC4 AC020922.3-201ENST00000595064 547 ntBASIC13.56□□□□□ -0.24
PDLIM5Q96HC4 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PDLIM5Q96HC4 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
PDLIM5Q96HC4 POM121L14P-201ENST00000406100 1558 ntBASIC13.56□□□□□ -0.24
PDLIM5Q96HC4 ERG-211ENST00000453032 1595 ntTSL 2 BASIC13.56□□□□□ -0.24
PDLIM5Q96HC4 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
PDLIM5Q96HC4 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC13.56□□□□□ -0.24
PDLIM5Q96HC4 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PDLIM5Q96HC4 PDXDC2P-206ENST00000534700 1315 ntBASIC13.56□□□□□ -0.24
PDLIM5Q96HC4 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
PDLIM5Q96HC4 SLC5A11-211ENST00000569071 1919 ntTSL 5 BASIC13.56□□□□□ -0.24
PDLIM5Q96HC4 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PDLIM5Q96HC4 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
PDLIM5Q96HC4 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC13.56□□□□□ -0.24
PDLIM5Q96HC4 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
PDLIM5Q96HC4 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
PDLIM5Q96HC4 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PDLIM5Q96HC4 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
PDLIM5Q96HC4 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
PDLIM5Q96HC4 AL513497.1-201ENST00000624273 2083 ntBASIC13.55□□□□□ -0.24
PDLIM5Q96HC4 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
PDLIM5Q96HC4 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC13.55□□□□□ -0.24
PDLIM5Q96HC4 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC13.55□□□□□ -0.24
PDLIM5Q96HC4 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
PDLIM5Q96HC4 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
PDLIM5Q96HC4 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
PDLIM5Q96HC4 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.55□□□□□ -0.24
PDLIM5Q96HC4 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PDLIM5Q96HC4 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PDLIM5Q96HC4 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC13.55□□□□□ -0.24
PDLIM5Q96HC4 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PDLIM5Q96HC4 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC13.55□□□□□ -0.24
PDLIM5Q96HC4 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
PDLIM5Q96HC4 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PDLIM5Q96HC4 PTENP1-202ENST00000532280 3996 ntBASIC13.55□□□□□ -0.24
PDLIM5Q96HC4 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.55□□□□□ -0.24
PDLIM5Q96HC4 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PDLIM5Q96HC4 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC13.55□□□□□ -0.24
PDLIM5Q96HC4 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PDLIM5Q96HC4 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
PDLIM5Q96HC4 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
PDLIM5Q96HC4 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
PDLIM5Q96HC4 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC13.55□□□□□ -0.24
PDLIM5Q96HC4 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
PDLIM5Q96HC4 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC13.55□□□□□ -0.24
PDLIM5Q96HC4 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
PDLIM5Q96HC4 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC13.55□□□□□ -0.24
PDLIM5Q96HC4 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PDLIM5Q96HC4 AC018638.5-201ENST00000450885 754 ntBASIC13.55□□□□□ -0.24
PDLIM5Q96HC4 OAZ3-203ENST00000453029 729 ntTSL 5 BASIC13.55□□□□□ -0.24
PDLIM5Q96HC4 AP000358.1-201ENST00000456260 156 ntBASIC13.55□□□□□ -0.24
PDLIM5Q96HC4 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC13.55□□□□□ -0.24
PDLIM5Q96HC4 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms