Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TMEM54Q969K7 TCAF1P1-201ENST00000414990 2232 ntBASIC12.23□□□□□ -0.45
TMEM54Q969K7 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC12.23□□□□□ -0.45
TMEM54Q969K7 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
TMEM54Q969K7 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
TMEM54Q969K7 AC073862.5-201ENST00000624129 2027 ntBASIC12.23□□□□□ -0.45
TMEM54Q969K7 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
TMEM54Q969K7 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
TMEM54Q969K7 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC12.23□□□□□ -0.45
TMEM54Q969K7 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TMEM54Q969K7 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TMEM54Q969K7 TP73-207ENST00000378290 1831 ntTSL 2 BASIC12.23□□□□□ -0.45
TMEM54Q969K7 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TMEM54Q969K7 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC12.22□□□□□ -0.45
TMEM54Q969K7 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
TMEM54Q969K7 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TMEM54Q969K7 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TMEM54Q969K7 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC12.22□□□□□ -0.45
TMEM54Q969K7 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
TMEM54Q969K7 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC12.22□□□□□ -0.45
TMEM54Q969K7 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TMEM54Q969K7 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TMEM54Q969K7 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
TMEM54Q969K7 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TMEM54Q969K7 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
TMEM54Q969K7 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TMEM54Q969K7 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
TMEM54Q969K7 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TMEM54Q969K7 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
TMEM54Q969K7 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC12.22□□□□□ -0.45
TMEM54Q969K7 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
TMEM54Q969K7 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
TMEM54Q969K7 DKKL1P1-201ENST00000400550 698 ntBASIC12.22□□□□□ -0.45
TMEM54Q969K7 OR2W2P-201ENST00000406313 909 ntBASIC12.22□□□□□ -0.45
TMEM54Q969K7 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC12.22□□□□□ -0.45
TMEM54Q969K7 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC12.22□□□□□ -0.45
TMEM54Q969K7 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC12.22□□□□□ -0.45
TMEM54Q969K7 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC12.22□□□□□ -0.45
TMEM54Q969K7 RN7SL767P-201ENST00000493013 295 ntBASIC12.22□□□□□ -0.45
TMEM54Q969K7 ORAOV1P1-201ENST00000503108 395 ntBASIC12.22□□□□□ -0.45
TMEM54Q969K7 AC134698.3-201ENST00000523880 214 ntBASIC12.22□□□□□ -0.45
TMEM54Q969K7 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC12.22□□□□□ -0.45
TMEM54Q969K7 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC12.22□□□□□ -0.45
TMEM54Q969K7 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC12.22□□□□□ -0.45
TMEM54Q969K7 IGHV3OR16-16-201ENST00000563644 343 ntBASIC12.22□□□□□ -0.45
TMEM54Q969K7 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC12.22□□□□□ -0.45
TMEM54Q969K7 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC12.22□□□□□ -0.45
TMEM54Q969K7 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TMEM54Q969K7 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC12.22□□□□□ -0.45
TMEM54Q969K7 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC12.22□□□□□ -0.45
TMEM54Q969K7 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC12.22□□□□□ -0.45
TMEM54Q969K7 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC12.22□□□□□ -0.45
TMEM54Q969K7 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC12.22□□□□□ -0.45
TMEM54Q969K7 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
TMEM54Q969K7 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
TMEM54Q969K7 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TMEM54Q969K7 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
TMEM54Q969K7 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC12.22□□□□□ -0.45
TMEM54Q969K7 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TMEM54Q969K7 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC12.22□□□□□ -0.45
TMEM54Q969K7 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
TMEM54Q969K7 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TMEM54Q969K7 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TMEM54Q969K7 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TMEM54Q969K7 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TMEM54Q969K7 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
TMEM54Q969K7 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TMEM54Q969K7 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
TMEM54Q969K7 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
TMEM54Q969K7 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
TMEM54Q969K7 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TMEM54Q969K7 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TMEM54Q969K7 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC12.22□□□□□ -0.45
TMEM54Q969K7 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC12.22□□□□□ -0.45
TMEM54Q969K7 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
TMEM54Q969K7 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TMEM54Q969K7 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TMEM54Q969K7 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
TMEM54Q969K7 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC12.21□□□□□ -0.45
TMEM54Q969K7 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TMEM54Q969K7 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
TMEM54Q969K7 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TMEM54Q969K7 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC12.21□□□□□ -0.45
TMEM54Q969K7 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TMEM54Q969K7 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TMEM54Q969K7 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TMEM54Q969K7 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
TMEM54Q969K7 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TMEM54Q969K7 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
TMEM54Q969K7 AC008040.5-201ENST00000599781 1781 ntBASIC12.21□□□□□ -0.45
TMEM54Q969K7 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TMEM54Q969K7 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
TMEM54Q969K7 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TMEM54Q969K7 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TMEM54Q969K7 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC12.21□□□□□ -0.45
TMEM54Q969K7 NME6-203ENST00000415644 849 ntTSL 2 BASIC12.21□□□□□ -0.45
TMEM54Q969K7 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC12.21□□□□□ -0.45
TMEM54Q969K7 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC12.21□□□□□ -0.45
TMEM54Q969K7 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC12.21□□□□□ -0.45
TMEM54Q969K7 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms