Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SHROOM3Q8TF72 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SHROOM3Q8TF72 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC14.13□□□□□ -0.15
SHROOM3Q8TF72 AC138761.6-201ENST00000583997 1423 ntBASIC14.13□□□□□ -0.15
SHROOM3Q8TF72 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SHROOM3Q8TF72 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SHROOM3Q8TF72 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SHROOM3Q8TF72 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.13□□□□□ -0.15
SHROOM3Q8TF72 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SHROOM3Q8TF72 APP-205ENST00000358918 2366 ntTSL 5 BASIC14.13□□□□□ -0.15
SHROOM3Q8TF72 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
SHROOM3Q8TF72 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SHROOM3Q8TF72 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
SHROOM3Q8TF72 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SHROOM3Q8TF72 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SHROOM3Q8TF72 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SHROOM3Q8TF72 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SHROOM3Q8TF72 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
SHROOM3Q8TF72 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
SHROOM3Q8TF72 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC14.13□□□□□ -0.15
SHROOM3Q8TF72 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC14.13□□□□□ -0.15
SHROOM3Q8TF72 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SHROOM3Q8TF72 CHCHD2P9-201ENST00000461726 456 ntBASIC14.13□□□□□ -0.15
SHROOM3Q8TF72 RPL18AP8-201ENST00000486071 528 ntBASIC14.13□□□□□ -0.15
SHROOM3Q8TF72 REEP5-205ENST00000504247 480 ntTSL 5 BASIC14.13□□□□□ -0.15
SHROOM3Q8TF72 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC14.13□□□□□ -0.15
SHROOM3Q8TF72 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC14.13□□□□□ -0.15
SHROOM3Q8TF72 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SHROOM3Q8TF72 DNM1P30-201ENST00000563586 452 ntBASIC14.13□□□□□ -0.15
SHROOM3Q8TF72 SNORD3B-1-201ENST00000577988 758 ntBASIC14.13□□□□□ -0.15
SHROOM3Q8TF72 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC14.13□□□□□ -0.15
SHROOM3Q8TF72 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC14.13□□□□□ -0.15
SHROOM3Q8TF72 AC107464.3-201ENST00000609172 737 ntBASIC14.13□□□□□ -0.15
SHROOM3Q8TF72 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
SHROOM3Q8TF72 AL353770.1-201ENST00000614915 403 ntBASIC14.13□□□□□ -0.15
SHROOM3Q8TF72 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SHROOM3Q8TF72 AC138466.4-201ENST00000623965 852 ntBASIC14.13□□□□□ -0.15
SHROOM3Q8TF72 TBC1D27-202ENST00000424239 1573 ntBASIC14.13□□□□□ -0.15
SHROOM3Q8TF72 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SHROOM3Q8TF72 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SHROOM3Q8TF72 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SHROOM3Q8TF72 AC006372.4-201ENST00000624122 1543 ntBASIC14.13□□□□□ -0.15
SHROOM3Q8TF72 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SHROOM3Q8TF72 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
SHROOM3Q8TF72 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
SHROOM3Q8TF72 AC024075.2-201ENST00000598112 1473 ntBASIC14.13□□□□□ -0.15
SHROOM3Q8TF72 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SHROOM3Q8TF72 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SHROOM3Q8TF72 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SHROOM3Q8TF72 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
SHROOM3Q8TF72 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC14.13□□□□□ -0.15
SHROOM3Q8TF72 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SHROOM3Q8TF72 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC14.13□□□□□ -0.15
SHROOM3Q8TF72 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
SHROOM3Q8TF72 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SHROOM3Q8TF72 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SHROOM3Q8TF72 SLC26A8-202ENST00000394602 3144 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SHROOM3Q8TF72 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SHROOM3Q8TF72 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SHROOM3Q8TF72 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SHROOM3Q8TF72 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SHROOM3Q8TF72 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
SHROOM3Q8TF72 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC14.13□□□□□ -0.15
SHROOM3Q8TF72 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC14.13□□□□□ -0.15
SHROOM3Q8TF72 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC14.13□□□□□ -0.15
SHROOM3Q8TF72 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SHROOM3Q8TF72 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SHROOM3Q8TF72 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC14.13□□□□□ -0.15
SHROOM3Q8TF72 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC14.13□□□□□ -0.15
SHROOM3Q8TF72 OAZ3-203ENST00000453029 729 ntTSL 5 BASIC14.13□□□□□ -0.15
SHROOM3Q8TF72 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC14.13□□□□□ -0.15
SHROOM3Q8TF72 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC14.13□□□□□ -0.15
SHROOM3Q8TF72 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC14.13□□□□□ -0.15
SHROOM3Q8TF72 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC14.13□□□□□ -0.15
SHROOM3Q8TF72 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC14.13□□□□□ -0.15
SHROOM3Q8TF72 CR392039.2-201ENST00000623182 509 ntBASIC14.13□□□□□ -0.15
SHROOM3Q8TF72 AL592295.3-201ENST00000637155 863 ntTSL 5 BASIC14.13□□□□□ -0.15
SHROOM3Q8TF72 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SHROOM3Q8TF72 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
SHROOM3Q8TF72 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
SHROOM3Q8TF72 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SHROOM3Q8TF72 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.12□□□□□ -0.15
SHROOM3Q8TF72 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
SHROOM3Q8TF72 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
SHROOM3Q8TF72 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SHROOM3Q8TF72 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SHROOM3Q8TF72 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
SHROOM3Q8TF72 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SHROOM3Q8TF72 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SHROOM3Q8TF72 SLC4A11-207ENST00000539553 2832 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
SHROOM3Q8TF72 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SHROOM3Q8TF72 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SHROOM3Q8TF72 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC14.12□□□□□ -0.15
SHROOM3Q8TF72 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC14.12□□□□□ -0.15
SHROOM3Q8TF72 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SHROOM3Q8TF72 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SHROOM3Q8TF72 AC079112.1-201ENST00000454972 939 ntBASIC14.12□□□□□ -0.15
SHROOM3Q8TF72 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC14.12□□□□□ -0.15
SHROOM3Q8TF72 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SHROOM3Q8TF72 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms