Protein–RNA interactions for Protein: Q8NFY4

SEMA6D, Semaphorin-6D, humanhuman

Predictions only

Length 1,073 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6DQ8NFY4 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
SEMA6DQ8NFY4 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SEMA6DQ8NFY4 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC12.3□□□□□ -0.44
SEMA6DQ8NFY4 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
SEMA6DQ8NFY4 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SEMA6DQ8NFY4 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SEMA6DQ8NFY4 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SEMA6DQ8NFY4 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
SEMA6DQ8NFY4 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
SEMA6DQ8NFY4 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC12.3□□□□□ -0.44
SEMA6DQ8NFY4 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC12.3□□□□□ -0.44
SEMA6DQ8NFY4 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SEMA6DQ8NFY4 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC12.3□□□□□ -0.44
SEMA6DQ8NFY4 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SEMA6DQ8NFY4 AC092580.1-201ENST00000433998 658 ntBASIC12.3□□□□□ -0.44
SEMA6DQ8NFY4 PTPA-217ENST00000434095 870 ntTSL 2 BASIC12.3□□□□□ -0.44
SEMA6DQ8NFY4 XBP1P1-201ENST00000436573 652 ntBASIC12.3□□□□□ -0.44
SEMA6DQ8NFY4 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC12.3□□□□□ -0.44
SEMA6DQ8NFY4 RPS2P36-201ENST00000456516 831 ntBASIC12.3□□□□□ -0.44
SEMA6DQ8NFY4 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC12.3□□□□□ -0.44
SEMA6DQ8NFY4 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SEMA6DQ8NFY4 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC12.3□□□□□ -0.44
SEMA6DQ8NFY4 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC12.3□□□□□ -0.44
SEMA6DQ8NFY4 AC245884.6-201ENST00000515672 1067 ntBASIC12.3□□□□□ -0.44
SEMA6DQ8NFY4 SCARNA21-201ENST00000517026 139 ntBASIC12.3□□□□□ -0.44
SEMA6DQ8NFY4 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC12.3□□□□□ -0.44
SEMA6DQ8NFY4 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC12.3□□□□□ -0.44
SEMA6DQ8NFY4 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SEMA6DQ8NFY4 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
SEMA6DQ8NFY4 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SEMA6DQ8NFY4 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC12.3□□□□□ -0.44
SEMA6DQ8NFY4 AC097724.1-201ENST00000609581 426 ntBASIC12.3□□□□□ -0.44
SEMA6DQ8NFY4 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC12.3□□□□□ -0.44
SEMA6DQ8NFY4 AC128714.1-201ENST00000637035 887 ntBASIC12.3□□□□□ -0.44
SEMA6DQ8NFY4 AL365181.3-201ENST00000605886 3222 ntBASIC12.3□□□□□ -0.44
SEMA6DQ8NFY4 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SEMA6DQ8NFY4 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC12.3□□□□□ -0.44
SEMA6DQ8NFY4 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SEMA6DQ8NFY4 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SEMA6DQ8NFY4 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SEMA6DQ8NFY4 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
SEMA6DQ8NFY4 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC12.3□□□□□ -0.44
SEMA6DQ8NFY4 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SEMA6DQ8NFY4 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC12.3□□□□□ -0.44
SEMA6DQ8NFY4 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
SEMA6DQ8NFY4 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SEMA6DQ8NFY4 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SEMA6DQ8NFY4 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SEMA6DQ8NFY4 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
SEMA6DQ8NFY4 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
SEMA6DQ8NFY4 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SEMA6DQ8NFY4 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
SEMA6DQ8NFY4 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SEMA6DQ8NFY4 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SEMA6DQ8NFY4 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
SEMA6DQ8NFY4 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC12.3□□□□□ -0.44
SEMA6DQ8NFY4 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC12.3□□□□□ -0.44
SEMA6DQ8NFY4 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
SEMA6DQ8NFY4 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC12.3□□□□□ -0.44
SEMA6DQ8NFY4 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC12.3□□□□□ -0.44
SEMA6DQ8NFY4 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
SEMA6DQ8NFY4 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SEMA6DQ8NFY4 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SEMA6DQ8NFY4 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SEMA6DQ8NFY4 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SEMA6DQ8NFY4 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
SEMA6DQ8NFY4 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SEMA6DQ8NFY4 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SEMA6DQ8NFY4 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
SEMA6DQ8NFY4 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC12.29□□□□□ -0.44
SEMA6DQ8NFY4 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SEMA6DQ8NFY4 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SEMA6DQ8NFY4 AC114271.1-201ENST00000612689 2813 ntBASIC12.29□□□□□ -0.44
SEMA6DQ8NFY4 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC12.29□□□□□ -0.44
SEMA6DQ8NFY4 TSN-212ENST00000536142 3328 ntTSL 2 BASIC12.29□□□□□ -0.44
SEMA6DQ8NFY4 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC12.29□□□□□ -0.44
SEMA6DQ8NFY4 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC12.29□□□□□ -0.44
SEMA6DQ8NFY4 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC12.29□□□□□ -0.44
SEMA6DQ8NFY4 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SEMA6DQ8NFY4 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SEMA6DQ8NFY4 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC12.29□□□□□ -0.44
SEMA6DQ8NFY4 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC12.29□□□□□ -0.44
SEMA6DQ8NFY4 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SEMA6DQ8NFY4 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SEMA6DQ8NFY4 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC12.29□□□□□ -0.44
SEMA6DQ8NFY4 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC12.29□□□□□ -0.44
SEMA6DQ8NFY4 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC12.29□□□□□ -0.44
SEMA6DQ8NFY4 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC12.29□□□□□ -0.44
SEMA6DQ8NFY4 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SEMA6DQ8NFY4 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SEMA6DQ8NFY4 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC12.29□□□□□ -0.44
SEMA6DQ8NFY4 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
SEMA6DQ8NFY4 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC12.29□□□□□ -0.44
SEMA6DQ8NFY4 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SEMA6DQ8NFY4 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SEMA6DQ8NFY4 MIR769-201ENST00000390225 118 ntBASIC12.29□□□□□ -0.44
SEMA6DQ8NFY4 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
SEMA6DQ8NFY4 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC12.29□□□□□ -0.44
SEMA6DQ8NFY4 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SEMA6DQ8NFY4 CYP46A4P-201ENST00000414953 267 ntBASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms