Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDKAL1Q5VV42 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CDKAL1Q5VV42 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDKAL1Q5VV42 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDKAL1Q5VV42 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC15.17■□□□□ 0.02
CDKAL1Q5VV42 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDKAL1Q5VV42 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDKAL1Q5VV42 SULT2A1-201ENST00000222002 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDKAL1Q5VV42 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CDKAL1Q5VV42 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CDKAL1Q5VV42 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDKAL1Q5VV42 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC15.17■□□□□ 0.02
CDKAL1Q5VV42 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC15.17■□□□□ 0.02
CDKAL1Q5VV42 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDKAL1Q5VV42 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDKAL1Q5VV42 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDKAL1Q5VV42 KRT17P5-201ENST00000332088 839 ntBASIC15.17■□□□□ 0.02
CDKAL1Q5VV42 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDKAL1Q5VV42 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDKAL1Q5VV42 RN7SKP214-201ENST00000364208 315 ntBASIC15.17■□□□□ 0.02
CDKAL1Q5VV42 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC15.17■□□□□ 0.02
CDKAL1Q5VV42 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDKAL1Q5VV42 PTPA-218ENST00000435132 618 ntTSL 2 BASIC15.17■□□□□ 0.02
CDKAL1Q5VV42 AC003958.1-201ENST00000435883 421 ntBASIC15.17■□□□□ 0.02
CDKAL1Q5VV42 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC15.17■□□□□ 0.02
CDKAL1Q5VV42 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDKAL1Q5VV42 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDKAL1Q5VV42 AC044849.1-201ENST00000519737 1188 ntBASIC15.17■□□□□ 0.02
CDKAL1Q5VV42 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDKAL1Q5VV42 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDKAL1Q5VV42 AL583810.1-201ENST00000553344 1045 ntBASIC15.17■□□□□ 0.02
CDKAL1Q5VV42 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC15.17■□□□□ 0.02
CDKAL1Q5VV42 SYT17-208ENST00000568433 812 ntTSL 3 BASIC15.17■□□□□ 0.02
CDKAL1Q5VV42 MIR4326-201ENST00000582203 59 ntBASIC15.17■□□□□ 0.02
CDKAL1Q5VV42 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC15.17■□□□□ 0.02
CDKAL1Q5VV42 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC15.17■□□□□ 0.02
CDKAL1Q5VV42 AL133467.4-201ENST00000602953 725 ntBASIC15.17■□□□□ 0.02
CDKAL1Q5VV42 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
CDKAL1Q5VV42 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDKAL1Q5VV42 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDKAL1Q5VV42 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDKAL1Q5VV42 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDKAL1Q5VV42 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDKAL1Q5VV42 AC104590.1-202ENST00000558368 1921 ntBASIC15.17■□□□□ 0.02
CDKAL1Q5VV42 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDKAL1Q5VV42 HNRNPLP1-201ENST00000421896 1501 ntBASIC15.17■□□□□ 0.02
CDKAL1Q5VV42 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDKAL1Q5VV42 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
CDKAL1Q5VV42 MEIS2-215ENST00000559561 1442 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
CDKAL1Q5VV42 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC15.17■□□□□ 0.02
CDKAL1Q5VV42 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDKAL1Q5VV42 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC15.17■□□□□ 0.02
CDKAL1Q5VV42 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDKAL1Q5VV42 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC15.16■□□□□ 0.02
CDKAL1Q5VV42 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CDKAL1Q5VV42 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC15.16■□□□□ 0.02
CDKAL1Q5VV42 RHOH-222ENST00000617441 1872 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CDKAL1Q5VV42 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CDKAL1Q5VV42 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDKAL1Q5VV42 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDKAL1Q5VV42 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC15.16■□□□□ 0.02
CDKAL1Q5VV42 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC15.16■□□□□ 0.02
CDKAL1Q5VV42 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC15.16■□□□□ 0.02
CDKAL1Q5VV42 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDKAL1Q5VV42 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDKAL1Q5VV42 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDKAL1Q5VV42 RBM22P2-201ENST00000393978 1814 ntBASIC15.16■□□□□ 0.02
CDKAL1Q5VV42 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDKAL1Q5VV42 RPS3-201ENST00000278572 907 ntTSL 3 BASIC15.16■□□□□ 0.02
CDKAL1Q5VV42 LMO1-201ENST00000335790 1279 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDKAL1Q5VV42 AC106827.1-201ENST00000366454 431 ntBASIC15.16■□□□□ 0.02
CDKAL1Q5VV42 MIR658-201ENST00000385210 100 ntBASIC15.16■□□□□ 0.02
CDKAL1Q5VV42 NME4-203ENST00000397722 1232 ntTSL 2 BASIC15.16■□□□□ 0.02
CDKAL1Q5VV42 SSR4P1-201ENST00000415143 412 ntBASIC15.16■□□□□ 0.02
CDKAL1Q5VV42 DNAJB1P1-201ENST00000429417 1024 ntBASIC15.16■□□□□ 0.02
CDKAL1Q5VV42 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC15.16■□□□□ 0.02
CDKAL1Q5VV42 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC15.16■□□□□ 0.02
CDKAL1Q5VV42 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC15.16■□□□□ 0.02
CDKAL1Q5VV42 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC15.16■□□□□ 0.02
CDKAL1Q5VV42 LMO1-204ENST00000534484 770 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
CDKAL1Q5VV42 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
CDKAL1Q5VV42 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CDKAL1Q5VV42 KLF17P1-201ENST00000547105 1126 ntBASIC15.16■□□□□ 0.02
CDKAL1Q5VV42 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC15.16■□□□□ 0.02
CDKAL1Q5VV42 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC15.16■□□□□ 0.02
CDKAL1Q5VV42 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC15.16■□□□□ 0.02
CDKAL1Q5VV42 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC15.16■□□□□ 0.02
CDKAL1Q5VV42 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC15.16■□□□□ 0.02
CDKAL1Q5VV42 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDKAL1Q5VV42 AC244453.2-201ENST00000457996 3543 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CDKAL1Q5VV42 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDKAL1Q5VV42 RAB37-203ENST00000392612 2528 ntTSL 2 BASIC15.16■□□□□ 0.02
CDKAL1Q5VV42 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDKAL1Q5VV42 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDKAL1Q5VV42 TRIM60-201ENST00000341062 1867 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CDKAL1Q5VV42 TMEM182-202ENST00000409528 3112 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CDKAL1Q5VV42 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
CDKAL1Q5VV42 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDKAL1Q5VV42 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CDKAL1Q5VV42 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms