Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 PGAM1P10-201ENST00000402426 761 ntBASIC20.18■□□□□ 0.82
CDC42BPAQ5VT25 SERF2-205ENST00000403425 690 ntTSL 2 BASIC20.18■□□□□ 0.82
CDC42BPAQ5VT25 IDI2-AS1-204ENST00000437374 896 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDC42BPAQ5VT25 Z84721.1-201ENST00000438841 372 ntBASIC20.18■□□□□ 0.82
CDC42BPAQ5VT25 RN7SL677P-201ENST00000466970 319 ntBASIC20.18■□□□□ 0.82
CDC42BPAQ5VT25 PAX5-213ENST00000523145 830 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDC42BPAQ5VT25 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC20.18■□□□□ 0.82
CDC42BPAQ5VT25 MST1L-204ENST00000545160 559 ntTSL 4 BASIC20.18■□□□□ 0.82
CDC42BPAQ5VT25 AC026304.1-201ENST00000597953 561 ntBASIC20.18■□□□□ 0.82
CDC42BPAQ5VT25 LINC00643-207ENST00000637212 734 ntBASIC20.18■□□□□ 0.82
CDC42BPAQ5VT25 CAMK2B-202ENST00000346990 1448 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDC42BPAQ5VT25 CYP2B7P-201ENST00000541697 1476 ntBASIC20.18■□□□□ 0.82
CDC42BPAQ5VT25 SMARCA2-254ENST00000636903 2471 ntTSL 5 BASIC20.18■□□□□ 0.82
CDC42BPAQ5VT25 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDC42BPAQ5VT25 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
CDC42BPAQ5VT25 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDC42BPAQ5VT25 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
CDC42BPAQ5VT25 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDC42BPAQ5VT25 IMMP1L-215ENST00000534812 612 ntTSL 2 BASIC20.17■□□□□ 0.82
CDC42BPAQ5VT25 AC012617.1-202ENST00000586488 509 ntTSL 2 BASIC20.17■□□□□ 0.82
CDC42BPAQ5VT25 Metazoa_SRP.68-201ENST00000612673 282 ntBASIC20.17■□□□□ 0.82
CDC42BPAQ5VT25 AL161937.2-201ENST00000615503 403 ntTSL 2 BASIC20.17■□□□□ 0.82
CDC42BPAQ5VT25 LINC01137-201ENST00000424989 1395 ntTSL 2 BASIC20.17■□□□□ 0.82
CDC42BPAQ5VT25 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CDC42BPAQ5VT25 GMPR2-224ENST00000559910 1562 ntTSL 5 BASIC20.17■□□□□ 0.82
CDC42BPAQ5VT25 AC005549.1-201ENST00000579438 1629 ntBASIC20.17■□□□□ 0.82
CDC42BPAQ5VT25 IP6K2-221ENST00000449610 1673 ntTSL 2 BASIC20.17■□□□□ 0.82
CDC42BPAQ5VT25 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDC42BPAQ5VT25 DDC-214ENST00000622873 1839 ntTSL 3 BASIC20.17■□□□□ 0.82
CDC42BPAQ5VT25 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CDC42BPAQ5VT25 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDC42BPAQ5VT25 FAM90A12P-201ENST00000519497 2375 ntBASIC20.17■□□□□ 0.82
CDC42BPAQ5VT25 FAM90A24P-201ENST00000520792 2369 ntBASIC20.17■□□□□ 0.82
CDC42BPAQ5VT25 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC20.17■□□□□ 0.82
CDC42BPAQ5VT25 ADD1-207ENST00000446856 3745 ntTSL 5 BASIC20.17■□□□□ 0.82
CDC42BPAQ5VT25 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC20.17■□□□□ 0.82
CDC42BPAQ5VT25 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC20.17■□□□□ 0.82
CDC42BPAQ5VT25 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDC42BPAQ5VT25 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDC42BPAQ5VT25 AC073488.1-201ENST00000416620 1600 ntBASIC20.16■□□□□ 0.82
CDC42BPAQ5VT25 AC244154.1-201ENST00000620148 1555 ntBASIC20.16■□□□□ 0.82
CDC42BPAQ5VT25 ATP5J-204ENST00000400093 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDC42BPAQ5VT25 SYCE3-201ENST00000402753 342 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDC42BPAQ5VT25 AC022211.3-201ENST00000584339 400 ntTSL 3 BASIC20.16■□□□□ 0.82
CDC42BPAQ5VT25 AC112220.4-201ENST00000604982 1263 ntBASIC20.16■□□□□ 0.82
CDC42BPAQ5VT25 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC20.16■□□□□ 0.82
CDC42BPAQ5VT25 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDC42BPAQ5VT25 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC20.16■□□□□ 0.82
CDC42BPAQ5VT25 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDC42BPAQ5VT25 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDC42BPAQ5VT25 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CDC42BPAQ5VT25 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDC42BPAQ5VT25 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDC42BPAQ5VT25 GMPR2-201ENST00000348719 1684 ntTSL 5 BASIC20.16■□□□□ 0.82
CDC42BPAQ5VT25 CREBRF-203ENST00000520420 1660 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CDC42BPAQ5VT25 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDC42BPAQ5VT25 SUCLG2-204ENST00000493112 1516 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDC42BPAQ5VT25 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDC42BPAQ5VT25 ALLC-201ENST00000252505 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDC42BPAQ5VT25 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC20.16■□□□□ 0.82
CDC42BPAQ5VT25 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDC42BPAQ5VT25 AC005154.3-201ENST00000419639 1393 ntBASIC20.16■□□□□ 0.82
CDC42BPAQ5VT25 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDC42BPAQ5VT25 AC140847.2-201ENST00000545923 501 ntTSL 3 BASIC20.16■□□□□ 0.82
CDC42BPAQ5VT25 ARPP19-206ENST00000564163 718 ntTSL 2 BASIC20.16■□□□□ 0.82
CDC42BPAQ5VT25 ANAPC11-214ENST00000578544 403 ntTSL 3 BASIC20.16■□□□□ 0.82
CDC42BPAQ5VT25 ALOX12P1-201ENST00000579299 1229 ntBASIC20.16■□□□□ 0.82
CDC42BPAQ5VT25 DMRTC1-201ENST00000595412 1190 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDC42BPAQ5VT25 TARM1-202ENST00000616041 1218 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
CDC42BPAQ5VT25 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDC42BPAQ5VT25 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CDC42BPAQ5VT25 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
CDC42BPAQ5VT25 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDC42BPAQ5VT25 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDC42BPAQ5VT25 STK3-218ENST00000617590 2485 ntTSL 5 BASIC20.15■□□□□ 0.82
CDC42BPAQ5VT25 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDC42BPAQ5VT25 NAP1L1-226ENST00000552342 1526 ntTSL 5 BASIC20.15■□□□□ 0.82
CDC42BPAQ5VT25 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDC42BPAQ5VT25 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CDC42BPAQ5VT25 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDC42BPAQ5VT25 SKAP1-208ENST00000584924 1477 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CDC42BPAQ5VT25 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDC42BPAQ5VT25 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CDC42BPAQ5VT25 AL591368.1-201ENST00000437181 1449 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CDC42BPAQ5VT25 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDC42BPAQ5VT25 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC20.15■□□□□ 0.82
CDC42BPAQ5VT25 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CDC42BPAQ5VT25 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC20.15■□□□□ 0.82
CDC42BPAQ5VT25 MT-ND6-201ENST00000361681 525 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
CDC42BPAQ5VT25 GZMH-202ENST00000382548 687 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CDC42BPAQ5VT25 KRTAP10-12-201ENST00000400365 873 ntAPPRIS P2 BASIC20.15■□□□□ 0.82
CDC42BPAQ5VT25 AC245128.1-201ENST00000400864 1294 ntTSL 5 BASIC20.15■□□□□ 0.82
CDC42BPAQ5VT25 RAB42P1-201ENST00000555078 316 ntBASIC20.15■□□□□ 0.82
CDC42BPAQ5VT25 SMIM22-206ENST00000589327 629 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDC42BPAQ5VT25 AL450487.2-201ENST00000615934 407 ntBASIC20.15■□□□□ 0.82
CDC42BPAQ5VT25 AP003900.1-201ENST00000622592 859 ntTSL 3 BASIC20.15■□□□□ 0.82
CDC42BPAQ5VT25 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CDC42BPAQ5VT25 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC20.15■□□□□ 0.82
CDC42BPAQ5VT25 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDC42BPAQ5VT25 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms