Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 AL365181.1-201ENST00000564032 1828 ntBASIC14.87□□□□□ -0.03
CTC1Q2NKJ3 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CTC1Q2NKJ3 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC14.87□□□□□ -0.03
CTC1Q2NKJ3 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CTC1Q2NKJ3 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CTC1Q2NKJ3 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC14.87□□□□□ -0.03
CTC1Q2NKJ3 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTC1Q2NKJ3 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTC1Q2NKJ3 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTC1Q2NKJ3 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTC1Q2NKJ3 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTC1Q2NKJ3 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTC1Q2NKJ3 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC14.86□□□□□ -0.03
CTC1Q2NKJ3 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTC1Q2NKJ3 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.86□□□□□ -0.03
CTC1Q2NKJ3 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC14.86□□□□□ -0.03
CTC1Q2NKJ3 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTC1Q2NKJ3 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTC1Q2NKJ3 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTC1Q2NKJ3 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CTC1Q2NKJ3 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTC1Q2NKJ3 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTC1Q2NKJ3 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTC1Q2NKJ3 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTC1Q2NKJ3 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CTC1Q2NKJ3 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CTC1Q2NKJ3 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CTC1Q2NKJ3 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTC1Q2NKJ3 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTC1Q2NKJ3 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CTC1Q2NKJ3 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CTC1Q2NKJ3 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTC1Q2NKJ3 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTC1Q2NKJ3 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTC1Q2NKJ3 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTC1Q2NKJ3 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
CTC1Q2NKJ3 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTC1Q2NKJ3 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC14.86□□□□□ -0.03
CTC1Q2NKJ3 FAM21EP-201ENST00000417804 985 ntBASIC14.86□□□□□ -0.03
CTC1Q2NKJ3 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC14.86□□□□□ -0.03
CTC1Q2NKJ3 AP000244.1-201ENST00000424582 201 ntBASIC14.86□□□□□ -0.03
CTC1Q2NKJ3 ARL4AP4-201ENST00000434170 518 ntBASIC14.86□□□□□ -0.03
CTC1Q2NKJ3 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC14.86□□□□□ -0.03
CTC1Q2NKJ3 RN7SKP155-201ENST00000516031 288 ntBASIC14.86□□□□□ -0.03
CTC1Q2NKJ3 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CTC1Q2NKJ3 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC14.86□□□□□ -0.03
CTC1Q2NKJ3 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC14.86□□□□□ -0.03
CTC1Q2NKJ3 BATF-202ENST00000555504 361 ntTSL 2 BASIC14.86□□□□□ -0.03
CTC1Q2NKJ3 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC14.86□□□□□ -0.03
CTC1Q2NKJ3 AC005274.1-201ENST00000623460 802 ntBASIC14.86□□□□□ -0.03
CTC1Q2NKJ3 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC14.86□□□□□ -0.03
CTC1Q2NKJ3 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTC1Q2NKJ3 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTC1Q2NKJ3 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CTC1Q2NKJ3 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC14.86□□□□□ -0.03
CTC1Q2NKJ3 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTC1Q2NKJ3 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CTC1Q2NKJ3 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTC1Q2NKJ3 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTC1Q2NKJ3 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTC1Q2NKJ3 CR383656.2-201ENST00000548656 2254 ntBASIC14.86□□□□□ -0.03
CTC1Q2NKJ3 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC14.86□□□□□ -0.03
CTC1Q2NKJ3 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CTC1Q2NKJ3 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTC1Q2NKJ3 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTC1Q2NKJ3 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTC1Q2NKJ3 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTC1Q2NKJ3 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTC1Q2NKJ3 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CTC1Q2NKJ3 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC14.85□□□□□ -0.03
CTC1Q2NKJ3 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CTC1Q2NKJ3 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC14.85□□□□□ -0.03
CTC1Q2NKJ3 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CTC1Q2NKJ3 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CTC1Q2NKJ3 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CTC1Q2NKJ3 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC14.85□□□□□ -0.03
CTC1Q2NKJ3 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC14.85□□□□□ -0.03
CTC1Q2NKJ3 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC14.85□□□□□ -0.03
CTC1Q2NKJ3 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CTC1Q2NKJ3 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CTC1Q2NKJ3 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC14.85□□□□□ -0.03
CTC1Q2NKJ3 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CTC1Q2NKJ3 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CTC1Q2NKJ3 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CTC1Q2NKJ3 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CTC1Q2NKJ3 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
CTC1Q2NKJ3 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
CTC1Q2NKJ3 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CTC1Q2NKJ3 STK24P1-201ENST00000455035 1291 ntBASIC14.85□□□□□ -0.03
CTC1Q2NKJ3 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC14.85□□□□□ -0.03
CTC1Q2NKJ3 AC092896.1-201ENST00000465850 380 ntBASIC14.85□□□□□ -0.03
CTC1Q2NKJ3 RPS18P9-201ENST00000482817 460 ntBASIC14.85□□□□□ -0.03
CTC1Q2NKJ3 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC14.85□□□□□ -0.03
CTC1Q2NKJ3 HNRNPA1P56-201ENST00000505767 954 ntBASIC14.85□□□□□ -0.03
CTC1Q2NKJ3 AC022447.6-201ENST00000515522 438 ntBASIC14.85□□□□□ -0.03
CTC1Q2NKJ3 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC14.85□□□□□ -0.03
CTC1Q2NKJ3 AC132872.1-201ENST00000566986 1195 ntBASIC14.85□□□□□ -0.03
CTC1Q2NKJ3 FBXO36P1-201ENST00000579006 471 ntBASIC14.85□□□□□ -0.03
CTC1Q2NKJ3 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC14.85□□□□□ -0.03
CTC1Q2NKJ3 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms