Protein–RNA interactions for Protein: Q0VF96

CGNL1, Cingulin-like protein 1, humanhuman

Predictions only

Length 1,302 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGNL1Q0VF96 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CGNL1Q0VF96 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CGNL1Q0VF96 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CGNL1Q0VF96 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC18.73■□□□□ 0.59
CGNL1Q0VF96 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CGNL1Q0VF96 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CGNL1Q0VF96 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CGNL1Q0VF96 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CGNL1Q0VF96 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC18.73■□□□□ 0.59
CGNL1Q0VF96 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
CGNL1Q0VF96 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CGNL1Q0VF96 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CGNL1Q0VF96 POLL-206ENST00000370172 2308 ntTSL 2 BASIC18.73■□□□□ 0.59
CGNL1Q0VF96 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CGNL1Q0VF96 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CGNL1Q0VF96 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC18.73■□□□□ 0.59
CGNL1Q0VF96 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CGNL1Q0VF96 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC18.73■□□□□ 0.59
CGNL1Q0VF96 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CGNL1Q0VF96 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CGNL1Q0VF96 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC18.73■□□□□ 0.59
CGNL1Q0VF96 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CGNL1Q0VF96 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CGNL1Q0VF96 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CGNL1Q0VF96 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CGNL1Q0VF96 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CGNL1Q0VF96 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC18.73■□□□□ 0.59
CGNL1Q0VF96 AP000354.1-201ENST00000396982 456 ntBASIC18.73■□□□□ 0.59
CGNL1Q0VF96 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC18.73■□□□□ 0.59
CGNL1Q0VF96 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CGNL1Q0VF96 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC18.73■□□□□ 0.59
CGNL1Q0VF96 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC18.73■□□□□ 0.59
CGNL1Q0VF96 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC18.73■□□□□ 0.59
CGNL1Q0VF96 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CGNL1Q0VF96 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC18.73■□□□□ 0.59
CGNL1Q0VF96 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CGNL1Q0VF96 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC18.73■□□□□ 0.59
CGNL1Q0VF96 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC18.73■□□□□ 0.59
CGNL1Q0VF96 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC18.73■□□□□ 0.59
CGNL1Q0VF96 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC18.73■□□□□ 0.59
CGNL1Q0VF96 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CGNL1Q0VF96 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC18.73■□□□□ 0.59
CGNL1Q0VF96 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC18.73■□□□□ 0.59
CGNL1Q0VF96 AC026120.2-201ENST00000617239 309 ntBASIC18.73■□□□□ 0.59
CGNL1Q0VF96 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC18.73■□□□□ 0.59
CGNL1Q0VF96 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CGNL1Q0VF96 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC18.73■□□□□ 0.59
CGNL1Q0VF96 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CGNL1Q0VF96 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CGNL1Q0VF96 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CGNL1Q0VF96 AC104581.4-201ENST00000623126 3052 ntBASIC18.72■□□□□ 0.59
CGNL1Q0VF96 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CGNL1Q0VF96 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC18.72■□□□□ 0.59
CGNL1Q0VF96 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CGNL1Q0VF96 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CGNL1Q0VF96 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CGNL1Q0VF96 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
CGNL1Q0VF96 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CGNL1Q0VF96 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CGNL1Q0VF96 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CGNL1Q0VF96 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CGNL1Q0VF96 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CGNL1Q0VF96 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC18.72■□□□□ 0.59
CGNL1Q0VF96 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CGNL1Q0VF96 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CGNL1Q0VF96 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CGNL1Q0VF96 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CGNL1Q0VF96 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CGNL1Q0VF96 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CGNL1Q0VF96 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
CGNL1Q0VF96 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CGNL1Q0VF96 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC18.72■□□□□ 0.59
CGNL1Q0VF96 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CGNL1Q0VF96 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CGNL1Q0VF96 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC18.72■□□□□ 0.59
CGNL1Q0VF96 AL365181.3-201ENST00000605886 3222 ntBASIC18.72■□□□□ 0.59
CGNL1Q0VF96 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CGNL1Q0VF96 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CGNL1Q0VF96 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CGNL1Q0VF96 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CGNL1Q0VF96 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CGNL1Q0VF96 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC18.72■□□□□ 0.59
CGNL1Q0VF96 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CGNL1Q0VF96 AGPAT5P1-201ENST00000455855 1019 ntBASIC18.72■□□□□ 0.59
CGNL1Q0VF96 RN7SL494P-201ENST00000461517 304 ntBASIC18.72■□□□□ 0.59
CGNL1Q0VF96 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
CGNL1Q0VF96 HNRNPA1P56-201ENST00000505767 954 ntBASIC18.72■□□□□ 0.59
CGNL1Q0VF96 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC18.72■□□□□ 0.59
CGNL1Q0VF96 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC18.72■□□□□ 0.59
CGNL1Q0VF96 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC18.72■□□□□ 0.59
CGNL1Q0VF96 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CGNL1Q0VF96 JPT2-214ENST00000569765 782 ntTSL 2 BASIC18.72■□□□□ 0.59
CGNL1Q0VF96 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CGNL1Q0VF96 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CGNL1Q0VF96 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC18.72■□□□□ 0.59
CGNL1Q0VF96 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CGNL1Q0VF96 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CGNL1Q0VF96 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC18.71■□□□□ 0.59
CGNL1Q0VF96 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC18.71■□□□□ 0.59
CGNL1Q0VF96 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms