Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC12.57□□□□□ -0.4
CDK5Q00535 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CDK5Q00535 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CDK5Q00535 MIR3615-201ENST00000581999 87 ntBASIC12.57□□□□□ -0.4
CDK5Q00535 CYGB-203ENST00000589145 788 ntTSL 3 BASIC12.57□□□□□ -0.4
CDK5Q00535 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC12.57□□□□□ -0.4
CDK5Q00535 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CDK5Q00535 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
CDK5Q00535 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
CDK5Q00535 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CDK5Q00535 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
CDK5Q00535 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC12.57□□□□□ -0.4
CDK5Q00535 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CDK5Q00535 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CDK5Q00535 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CDK5Q00535 SEC13-203ENST00000383801 1479 ntTSL 2 BASIC12.57□□□□□ -0.4
CDK5Q00535 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CDK5Q00535 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC12.57□□□□□ -0.4
CDK5Q00535 ITFG1-204ENST00000544001 1849 ntTSL 2 BASIC12.57□□□□□ -0.4
CDK5Q00535 AL031432.4-201ENST00000641729 2190 ntBASIC12.57□□□□□ -0.4
CDK5Q00535 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC12.57□□□□□ -0.4
CDK5Q00535 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
CDK5Q00535 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CDK5Q00535 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
CDK5Q00535 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
CDK5Q00535 SUPT20HL1-201ENST00000436466 2618 ntBASIC12.57□□□□□ -0.4
CDK5Q00535 SLC2A14-205ENST00000535295 1732 ntTSL 2 BASIC12.57□□□□□ -0.4
CDK5Q00535 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CDK5Q00535 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC12.56□□□□□ -0.4
CDK5Q00535 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
CDK5Q00535 KRT15-202ENST00000393974 3758 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CDK5Q00535 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CDK5Q00535 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC12.56□□□□□ -0.4
CDK5Q00535 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CDK5Q00535 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
CDK5Q00535 SLC23A1-202ENST00000353963 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CDK5Q00535 PPP2R2C-204ENST00000506140 1780 ntTSL 2 BASIC12.56□□□□□ -0.4
CDK5Q00535 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC12.56□□□□□ -0.4
CDK5Q00535 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
CDK5Q00535 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
CDK5Q00535 SLC26A8-202ENST00000394602 3144 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CDK5Q00535 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CDK5Q00535 CU639417.3-201ENST00000624240 1404 ntBASIC12.56□□□□□ -0.4
CDK5Q00535 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CDK5Q00535 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC12.56□□□□□ -0.4
CDK5Q00535 ZSCAN32-202ENST00000396846 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CDK5Q00535 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CDK5Q00535 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
CDK5Q00535 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
CDK5Q00535 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CDK5Q00535 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CDK5Q00535 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
CDK5Q00535 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CDK5Q00535 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CDK5Q00535 TPO-206ENST00000382269 1155 ntTSL 5 BASIC12.56□□□□□ -0.4
CDK5Q00535 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
CDK5Q00535 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC12.56□□□□□ -0.4
CDK5Q00535 NDUFAB1P1-201ENST00000404262 460 ntBASIC12.56□□□□□ -0.4
CDK5Q00535 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CDK5Q00535 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC12.56□□□□□ -0.4
CDK5Q00535 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC12.56□□□□□ -0.4
CDK5Q00535 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CDK5Q00535 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CDK5Q00535 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC12.56□□□□□ -0.4
CDK5Q00535 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC12.56□□□□□ -0.4
CDK5Q00535 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC12.56□□□□□ -0.4
CDK5Q00535 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC12.56□□□□□ -0.4
CDK5Q00535 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC12.56□□□□□ -0.4
CDK5Q00535 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC12.56□□□□□ -0.4
CDK5Q00535 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC12.56□□□□□ -0.4
CDK5Q00535 AC093752.3-201ENST00000567343 901 ntBASIC12.56□□□□□ -0.4
CDK5Q00535 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC12.56□□□□□ -0.4
CDK5Q00535 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC12.56□□□□□ -0.4
CDK5Q00535 SRP9-204ENST00000619790 377 ntTSL 2 BASIC12.56□□□□□ -0.4
CDK5Q00535 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CDK5Q00535 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
CDK5Q00535 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CDK5Q00535 AOC4P-203ENST00000566825 2289 ntBASIC12.56□□□□□ -0.4
CDK5Q00535 MICA-210ENST00000616296 2260 ntTSL 5 BASIC12.56□□□□□ -0.4
CDK5Q00535 AC012531.1-201ENST00000562848 2680 ntBASIC12.56□□□□□ -0.4
CDK5Q00535 AC027369.3-201ENST00000530465 3707 ntBASIC12.56□□□□□ -0.4
CDK5Q00535 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC12.56□□□□□ -0.4
CDK5Q00535 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC12.56□□□□□ -0.4
CDK5Q00535 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CDK5Q00535 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CDK5Q00535 MMD2-203ENST00000406755 2372 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CDK5Q00535 SULT2A1-201ENST00000222002 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CDK5Q00535 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
CDK5Q00535 NDRG2-201ENST00000298684 1784 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CDK5Q00535 USP2-AS1-202ENST00000500970 1784 ntTSL 2 BASIC12.56□□□□□ -0.4
CDK5Q00535 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
CDK5Q00535 NRADDP-202ENST00000641269 1585 ntBASIC12.56□□□□□ -0.4
CDK5Q00535 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CDK5Q00535 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CDK5Q00535 NDRG4-201ENST00000258187 3324 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CDK5Q00535 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CDK5Q00535 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC12.55□□□□□ -0.4
CDK5Q00535 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CDK5Q00535 ZNF197-204ENST00000383745 2935 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CDK5Q00535 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms