Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC15.58■□□□□ 0.08
ASIC1P78348 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
ASIC1P78348 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC15.58■□□□□ 0.08
ASIC1P78348 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC15.58■□□□□ 0.08
ASIC1P78348 RN7SL774P-201ENST00000577467 290 ntBASIC15.58■□□□□ 0.08
ASIC1P78348 HPN-206ENST00000597419 1212 ntTSL 5 BASIC15.58■□□□□ 0.08
ASIC1P78348 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC15.58■□□□□ 0.08
ASIC1P78348 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
ASIC1P78348 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC15.58■□□□□ 0.08
ASIC1P78348 LINC01783-202ENST00000614408 828 ntBASIC15.58■□□□□ 0.08
ASIC1P78348 MIR6769A-201ENST00000617340 73 ntBASIC15.58■□□□□ 0.08
ASIC1P78348 BX284668.2-205ENST00000619677 828 ntBASIC15.58■□□□□ 0.08
ASIC1P78348 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ASIC1P78348 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
ASIC1P78348 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
ASIC1P78348 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ASIC1P78348 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ASIC1P78348 AC004241.5-201ENST00000623870 2448 ntBASIC15.58■□□□□ 0.08
ASIC1P78348 AL358781.1-202ENST00000321081 1360 ntBASIC15.58■□□□□ 0.08
ASIC1P78348 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ASIC1P78348 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
ASIC1P78348 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
ASIC1P78348 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
ASIC1P78348 AC114271.1-201ENST00000612689 2813 ntBASIC15.58■□□□□ 0.08
ASIC1P78348 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
ASIC1P78348 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
ASIC1P78348 AC020763.3-201ENST00000625095 2904 ntBASIC15.57■□□□□ 0.08
ASIC1P78348 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ASIC1P78348 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
ASIC1P78348 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
ASIC1P78348 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC15.57■□□□□ 0.08
ASIC1P78348 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
ASIC1P78348 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ASIC1P78348 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
ASIC1P78348 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
ASIC1P78348 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
ASIC1P78348 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
ASIC1P78348 BANF1P3-201ENST00000412556 261 ntBASIC15.57■□□□□ 0.08
ASIC1P78348 GPAA1P2-201ENST00000417923 928 ntBASIC15.57■□□□□ 0.08
ASIC1P78348 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ASIC1P78348 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ASIC1P78348 RN7SL11P-201ENST00000471305 293 ntBASIC15.57■□□□□ 0.08
ASIC1P78348 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC15.57■□□□□ 0.08
ASIC1P78348 POU5F1P2-201ENST00000521750 823 ntBASIC15.57■□□□□ 0.08
ASIC1P78348 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
ASIC1P78348 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC15.57■□□□□ 0.08
ASIC1P78348 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC15.57■□□□□ 0.08
ASIC1P78348 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
ASIC1P78348 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC15.57■□□□□ 0.08
ASIC1P78348 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC15.57■□□□□ 0.08
ASIC1P78348 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
ASIC1P78348 AL133467.4-201ENST00000602953 725 ntBASIC15.57■□□□□ 0.08
ASIC1P78348 AL109837.1-201ENST00000603272 613 ntBASIC15.57■□□□□ 0.08
ASIC1P78348 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC15.57■□□□□ 0.08
ASIC1P78348 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ASIC1P78348 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC15.57■□□□□ 0.08
ASIC1P78348 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
ASIC1P78348 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ASIC1P78348 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
ASIC1P78348 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
ASIC1P78348 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
ASIC1P78348 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC15.57■□□□□ 0.08
ASIC1P78348 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
ASIC1P78348 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC15.57■□□□□ 0.08
ASIC1P78348 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ASIC1P78348 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ASIC1P78348 ZNF493-208ENST00000599461 1769 ntBASIC15.57■□□□□ 0.08
ASIC1P78348 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC15.57■□□□□ 0.08
ASIC1P78348 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
ASIC1P78348 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ASIC1P78348 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
ASIC1P78348 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ASIC1P78348 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ASIC1P78348 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ASIC1P78348 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC15.56■□□□□ 0.08
ASIC1P78348 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
ASIC1P78348 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC15.56■□□□□ 0.08
ASIC1P78348 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ASIC1P78348 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
ASIC1P78348 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ASIC1P78348 ELK2AP-201ENST00000392510 1007 ntBASIC15.56■□□□□ 0.08
ASIC1P78348 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC15.56■□□□□ 0.08
ASIC1P78348 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ASIC1P78348 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC15.56■□□□□ 0.08
ASIC1P78348 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC15.56■□□□□ 0.08
ASIC1P78348 NAGK-204ENST00000443872 878 ntTSL 3 BASIC15.56■□□□□ 0.08
ASIC1P78348 AKR7A2P1-201ENST00000460134 915 ntBASIC15.56■□□□□ 0.08
ASIC1P78348 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC15.56■□□□□ 0.08
ASIC1P78348 PACS1-203ENST00000524815 628 ntTSL 4 BASIC15.56■□□□□ 0.08
ASIC1P78348 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
ASIC1P78348 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC15.56■□□□□ 0.08
ASIC1P78348 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC15.56■□□□□ 0.08
ASIC1P78348 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
ASIC1P78348 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC15.56■□□□□ 0.08
ASIC1P78348 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ASIC1P78348 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ASIC1P78348 NAT9-211ENST00000580632 799 ntTSL 3 BASIC15.56■□□□□ 0.08
ASIC1P78348 CENPX-208ENST00000584347 799 ntTSL 2 BASIC15.56■□□□□ 0.08
ASIC1P78348 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
ASIC1P78348 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms