Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PER3P56645 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
PER3P56645 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PER3P56645 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PER3P56645 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC13.05□□□□□ -0.32
PER3P56645 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
PER3P56645 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PER3P56645 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
PER3P56645 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
PER3P56645 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PER3P56645 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
PER3P56645 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC13.05□□□□□ -0.32
PER3P56645 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
PER3P56645 AC144522.1-201ENST00000625111 1658 ntBASIC13.05□□□□□ -0.32
PER3P56645 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC13.05□□□□□ -0.32
PER3P56645 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC13.05□□□□□ -0.32
PER3P56645 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
PER3P56645 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
PER3P56645 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PER3P56645 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
PER3P56645 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
PER3P56645 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
PER3P56645 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
PER3P56645 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
PER3P56645 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC13.04□□□□□ -0.32
PER3P56645 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
PER3P56645 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
PER3P56645 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
PER3P56645 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
PER3P56645 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.04□□□□□ -0.32
PER3P56645 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
PER3P56645 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PER3P56645 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
PER3P56645 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
PER3P56645 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
PER3P56645 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
PER3P56645 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PER3P56645 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
PER3P56645 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PER3P56645 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PER3P56645 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
PER3P56645 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC13.04□□□□□ -0.32
PER3P56645 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC13.04□□□□□ -0.32
PER3P56645 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PER3P56645 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PER3P56645 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC13.04□□□□□ -0.32
PER3P56645 BANF1P3-201ENST00000412556 261 ntBASIC13.04□□□□□ -0.32
PER3P56645 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC13.04□□□□□ -0.32
PER3P56645 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
PER3P56645 PSMD4P1-201ENST00000433951 1109 ntBASIC13.04□□□□□ -0.32
PER3P56645 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC13.04□□□□□ -0.32
PER3P56645 RPSAP15-201ENST00000448168 861 ntBASIC13.04□□□□□ -0.32
PER3P56645 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC13.04□□□□□ -0.32
PER3P56645 AC114947.1-202ENST00000514136 344 ntBASIC13.04□□□□□ -0.32
PER3P56645 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PER3P56645 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC13.04□□□□□ -0.32
PER3P56645 AC141586.1-203ENST00000567242 366 ntBASIC13.04□□□□□ -0.32
PER3P56645 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC13.04□□□□□ -0.32
PER3P56645 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC13.04□□□□□ -0.32
PER3P56645 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC13.04□□□□□ -0.32
PER3P56645 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.04□□□□□ -0.32
PER3P56645 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC13.04□□□□□ -0.32
PER3P56645 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.04□□□□□ -0.32
PER3P56645 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
PER3P56645 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
PER3P56645 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PER3P56645 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
PER3P56645 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PER3P56645 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
PER3P56645 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PER3P56645 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
PER3P56645 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PER3P56645 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PER3P56645 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PER3P56645 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PER3P56645 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
PER3P56645 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC13.04□□□□□ -0.32
PER3P56645 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PER3P56645 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
PER3P56645 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
PER3P56645 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
PER3P56645 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
PER3P56645 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PER3P56645 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
PER3P56645 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
PER3P56645 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
PER3P56645 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PER3P56645 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
PER3P56645 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
PER3P56645 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
PER3P56645 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
PER3P56645 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PER3P56645 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PER3P56645 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
PER3P56645 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
PER3P56645 MIR557-201ENST00000385239 98 ntBASIC13.03□□□□□ -0.32
PER3P56645 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
PER3P56645 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
PER3P56645 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
PER3P56645 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms